Stars
Repository detailing updated allowlisting and clonal analysis workflow
Antibiotic resistance prediction in minutes
Repository to reproduce analyses from manuscript titled "Noninvasive blood tests for fetal development predict gestational age and preterm delivery"
A Transcriptomics-Proteomics Integration Pipeline
Genome-wide multimediator analyses using the generalized Berk-Jones statistics with the composite test
Single-cell ATAC-seq analysis via Latent feature Extraction
This package is used for large scale mining and exploratory visualization of gene set enrichment using EnrichR
A pipeline for the detection, quantification and statistical analysis of complex alternative splicing events
Supporting code and materials for GATK gCNV publication
PaperBLAST: find papers about a protein or its homologs
Genome browser for thousands of representative bacteria and archaea
Python module to query GBIF or the NCBI Taxonomy database for synonym names of target species.
A plugin to visualise 3D spatial single cell omics
Spatial Single Cell transcriptomic library
PhyloVelo, Phylogeny-based transcriptomic velocity of single cells
Simplistic 3D dictionary of amino acids using geometric shapes for UCSF Chimera
This software calculates a confidence interval for the mutation rate from a set of observed containment indices under a simple nucleotide mutation process.
Inferring and visualizing clonal evolution in multi-sample cancer sequencing