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Temporary Shorcut For Reading Arrow/Parquet Bits Into R via 'reticulate'

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sparrow

Temporary Shorcut For Reading Arrow/Parquet Bit Into R via ‘reticulate’

Description

Work is being done to make Parquet/Arrow a first-class R citizen but – until then – I don’t always want a Drill server round trip just to read in some data and same goes for firing up a Spark instance (srsly). So, this is a quick hack until the R packages are done.

NOTE

Requires Python 3.5+, pyarrow and pandas.

What’s Inside The Tin

The following functions are implemented:

  • read_parquet: Read in data from Parquet into an R data frame via ‘reticulate’

Installation

devtools::install_github("hrbrmstr/sparrow")

Usage

library(sparrow)

# current verison
packageVersion("sparrow")
## [1] '0.1.0'
read_parquet("/tmp/honeypot.parquet")
## # A tibble: 1,678,931 x 7
##       duration service proto ts                  src             src_country_code dport
##          <dbl> <chr>   <chr> <chr>               <chr>           <list>           <int>
##  1 121.        -       tcp   2018-01-23 19:55:09 154.70.142.5    <chr [1]>          445
##  2 108.        -       tcp   2018-01-23 20:02:54 46.29.195.27    <chr [1]>          445
##  3   0.0000380 -       tcp   2018-01-23 19:29:50 121.52.205.133  <chr [1]>          443
##  4  13.8       -       tcp   2018-01-23 20:07:03 199.227.118.42  <chr [1]>          445
##  5  17.4       -       tcp   2018-01-23 20:10:18 115.110.123.190 <chr [1]>          445
##  6  17.9       -       tcp   2018-01-23 20:14:02 221.132.113.69  <chr [1]>          445
##  7 117.        -       tcp   2018-01-23 20:14:47 201.238.247.234 <chr [1]>          445
##  8   2.22      ssh     tcp   2018-01-23 19:34:34 123.59.134.76   <chr [1]>           22
##  9  19.3       -       tcp   2018-01-23 20:19:05 185.120.222.35  <chr [1]>          445
## 10  27.7       -       tcp   2018-01-23 19:46:49 118.166.51.193  <chr [1]>          445
## # ... with 1,678,921 more rows
read_parquet("/tmp/honeypot.parquet", c("src", "duration"))
## # A tibble: 1,678,931 x 2
##    src                duration
##    <chr>                 <dbl>
##  1 154.70.142.5    121.       
##  2 46.29.195.27    108.       
##  3 121.52.205.133    0.0000380
##  4 199.227.118.42   13.8      
##  5 115.110.123.190  17.4      
##  6 221.132.113.69   17.9      
##  7 201.238.247.234 117.       
##  8 123.59.134.76     2.22     
##  9 185.120.222.35   19.3      
## 10 118.166.51.193   27.7      
## # ... with 1,678,921 more rows

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