Sequencing of the variable region of rpsB to discriminate between Streptococcus pneumoniae and other streptococcal species. (Q41995884)

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30 March 2020

title

Sequencing of the variable region of rpsB to discriminate between Streptococcus pneumoniae and other streptococcal species (English)

1 reference

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30 March 2020

main subject

Streptococcus pneumoniae

1 reference

1

1 reference

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30 March 2020

Diederik van de Beek

series ordinal

6

1 reference

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30 March 2020

Krzysztof Trzciński

series ordinal

8

1 reference

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30 March 2020

9

Arie van der Ende

1 reference

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30 March 2020

7

Elisabeth A M Sanders

1 reference

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Jody van Engelsdorp Gastelaars

30 March 2020

series ordinal

4

object named as

Jody van Engelsdorp Gastelaars

1 reference

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30 March 2020

2

Yvonne Pannekoek

1 reference

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30 March 2020

5

Bart Ferwerda

1 reference

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30 March 2020

3

Sandra Bovenkerk

1 reference

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30 March 2020

publication date

1 September 2017

1 reference

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30 March 2020

1 reference

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30 March 2020

volume

7

1 reference

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30 March 2020

issue

9

1 reference

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Zinc metalloproteinase ZmpC suppresses experimental pneumococcal meningitis by inhibiting bacterial invasion of central nervous systems.

30 March 2020

cites work

1 reference

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Naturally Acquired Human Immunity to Pneumococcus Is Dependent on Antibody to Protein Antigens

5 June 2018

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Capsular Polysaccharide Expression in Commensal Streptococcus Species: Genetic and Antigenic Similarities to Streptococcus pneumoniae

5 June 2018

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Molecular surveillance on Streptococcus pneumoniae carriage in non-elderly adults; little evidence for pneumococcal circulation independent from the reservoir in children

5 June 2018

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Re-evaluation of the taxonomy of the Mitis group of the genus Streptococcus based on whole genome phylogenetic analyses, and proposed reclassification of Streptococcus dentisani as Streptococcus oralis subsp. dentisani comb. nov., Streptococcus tigu

5 June 2018

1 reference

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lytA-based identification methods can misidentify Streptococcus pneumoniae

5 June 2018

1 reference

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Molecular surveillance of nasopharyngeal carriage of Streptococcus pneumoniae in children vaccinated with conjugated polysaccharide pneumococcal vaccines

5 June 2018

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Evaluation of phenotypic and molecular methods for identification of Streptococcus pneumoniae

5 June 2018

1 reference

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The PneuCarriage Project: A Multi-Centre Comparative Study to Identify the Best Serotyping Methods for Examining Pneumococcal Carriage in Vaccine Evaluation Studies

5 June 2018

1 reference

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Invasive Pneumococcal Disease 3 Years after Introduction of 10-Valent Pneumococcal Conjugate Vaccine, the Netherlands

5 June 2018

1 reference

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Dysbiosis of upper respiratory tract microbiota in elderly pneumonia patients

5 June 2018

1 reference

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Carriage of Streptococcus pneumoniae in aged adults with influenza-like-illness

5 June 2018

1 reference

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Genetic, biochemical, and serological characterization of a new pneumococcal serotype, 6H, and generation of a pneumococcal strain producing three different capsular repeat units

5 June 2018

1 reference

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Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages

5 June 2018

1 reference

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Non-typeable pneumococci circulating in Portugal are of cps type NCC2 and have genomic features typical of encapsulated isolates

5 June 2018

1 reference

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Parallel evolution of Streptococcus pneumoniae and Streptococcus mitis to pathogenic and mutualistic lifestyles

5 June 2018

1 reference

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The role of ZmpC in the clinical manifestation of invasive pneumococcal disease

5 June 2018

1 reference

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Streptococcus pneumoniae in saliva of Dutch primary school children

5 June 2018

1 reference

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Protective role of the capsule and impact of serotype 4 switching on Streptococcus mitis.

5 June 2018

1 reference

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Streptococcus mitis strains causing severe clinical disease in cancer patients

5 June 2018

1 reference

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Identifying Neisseria species by use of the 50S ribosomal protein L6 (rplF) gene.

5 June 2018

1 reference

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Dense genomic sampling identifies highways of pneumococcal recombination

5 June 2018

1 reference

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A novel high-throughput method for molecular serotyping and serotype-specific quantification of Streptococcus pneumoniae using a nanofluidic real-time PCR system.

5 June 2018

1 reference

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Standard method for detecting upper respiratory carriage of Streptococcus pneumoniae: updated recommendations from the World Health Organization Pneumococcal Carriage Working Group

5 June 2018

1 reference

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PATRIC, the bacterial bioinformatics database and analysis resource

5 June 2018

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Comparison of sputum and nasopharyngeal aspirate samples and of the PCR gene targets lytA and Spn9802 for quantitative PCR for rapid detection of pneumococcal pneumonia

5 June 2018

1 reference

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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0

5 June 2018

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Using pneumococcal carriage data to monitor postvaccination changes in invasive disease

5 June 2018

1 reference

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Intraclonal variations among Streptococcus pneumoniae isolates influence the likelihood of invasive disease in children

5 June 2018

1 reference

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Non-pneumococcal mitis-group streptococci confound detection of pneumococcal capsular serotype-specific loci in upper respiratory tract

5 June 2018

1 reference

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Superiority of trans-oral over trans-nasal sampling in detecting Streptococcus pneumoniae colonization in adults.

5 June 2018

1 reference

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Vaccines for preventing pneumococcal infection in adults

5 June 2018

1 reference

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Disease isolates of Streptococcus pseudopneumoniae and non-typeable S. pneumoniae presumptively identified as atypical S. pneumoniae in Spain

5 June 2018

1 reference

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Sequential triplex real-time PCR assay for detecting 21 pneumococcal capsular serotypes that account for a high global disease burden

5 June 2018

1 reference

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Characterization of recombinant fluoroquinolone-resistant pneumococcus-like isolates

5 June 2018

1 reference

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Occurrence and evolution of the paralogous zinc metalloproteases IgA1 protease, ZmpB, ZmpC, and ZmpD in Streptococcus pneumoniae and related commensal species

5 June 2018

1 reference

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From Quellung to multiplex PCR, and back when needed, in pneumococcal serotyping

5 June 2018

1 reference

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Nontypeable pneumococcal isolates among navajo and white mountain apache communities: are these really a cause of invasive disease?

5 June 2018

1 reference

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Nontypeable pneumococci can be divided into multiple cps types, including one type expressing the novel gene pspK

5 June 2018

1 reference

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Novel molecular method for identification of Streptococcus pneumoniae applicable to clinical microbiology and 16S rRNA sequence-based microbiome studies.

5 June 2018

1 reference

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Deep sequencing analyses of low density microbial communities: working at the boundary of accurate microbiota detection

5 June 2018

1 reference

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Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain.

5 June 2018

1 reference

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Evaluation of several biochemical and molecular techniques for identification of Streptococcus pneumoniae and Streptococcus pseudopneumoniae and their detection in respiratory samples

5 June 2018

1 reference

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Decrease in pneumococcal co-colonization following vaccination with the seven-valent pneumococcal conjugate vaccine

5 June 2018

1 reference

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Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarray

5 June 2018

1 reference

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Multiple colonization with S. pneumoniae before and after introduction of the seven-valent conjugated pneumococcal polysaccharide vaccine

5 June 2018

1 reference

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Comparison of transformation frequencies among selected Streptococcus pneumoniae serotypes

5 June 2018

1 reference

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Revisiting pneumococcal carriage by use of broth enrichment and PCR techniques for enhanced detection of carriage and serotypes

5 June 2018

1 reference

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Realtime PCR is more sensitive than multiplex PCR for diagnosis and serotyping in children with culture negative pneumococcal invasive disease

5 June 2018

1 reference

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Assigning strains to bacterial species via the internet

5 June 2018

1 reference

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Molecular detection methods and serotyping performed directly on clinical samples improve diagnostic sensitivity and reveal increased incidence of invasive disease by Streptococcus pneumoniae in Italian children.

5 June 2018

1 reference

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Evolution of Streptococcus pneumoniae and its close commensal relatives.

5 June 2018

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Sequential multiplex PCR approach for determining capsular serotypes of Streptococcus pneumoniae isolates

5 June 2018

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Antibodies to the iron uptake ABC transporter lipoproteins PiaA and PiuA promote opsonophagocytosis of Streptococcus pneumoniae

5 June 2018

1 reference

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Discrimination of Streptococcus pneumoniae from viridans group streptococci by genomic subtractive hybridization

5 June 2018

1 reference

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Accuracy of phenotypic and genotypic testing for identification of Streptococcus pneumoniae and description of Streptococcus pseudopneumoniae sp. nov

5 June 2018

1 reference

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What happened to the streptococci: overview of taxonomic and nomenclature changes

5 June 2018

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Characterization of pit, a Streptococcus pneumoniae iron uptake ABC transporter

5 June 2018

1 reference

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Identification of Streptococcus pneumoniae revisited

5 June 2018

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Optochin resistance in Streptococcus pneumoniae: mechanism, significance, and clinical implications

5 June 2018

1 reference

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Identification of the major Spanish clones of penicillin-resistant pneumococci via the Internet using multilocus sequence typing.

5 June 2018

1 reference

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Genetic relationships between clinical isolates of Streptococcus pneumoniae, Streptococcus oralis, and Streptococcus mitis: characterization of "Atypical" pneumococci and organisms allied to S. mitis harboring S. pneumoniae virulence factor-encoding

5 June 2018

1 reference

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Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation

5 June 2018

1 reference

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Prophage carriage as a molecular epidemiological marker in Streptococcus pneumoniae.

5 June 2018

1 reference

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Molecular characterization of equine isolates of Streptococcus pneumoniae: natural disruption of genes encoding the virulence factors pneumolysin and autolysin

5 June 2018

1 reference

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Serotyping of Streptococcus pneumoniae by coagglutination with 12 pooled antisera.

5 June 2018

1 reference

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Detection of Streptococcus pneumoniae in sputum samples by PCR

5 June 2018

1 reference

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Distribution of 13-valent pneumococcal conjugate vaccine Streptococcus pneumoniae serotypes in US adults aged ≥50 years with community-acquired pneumonia

5 June 2018

1 reference

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Pneumococcal immune evasion: ZmpC inhibits neutrophil influx

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Potential nonpneumococcal confounding of PCR-based determination of serotype in carriage

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Serotype prevalence in adults hospitalised with pneumococcal non-invasive community-acquired pneumonia

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Changes in pneumococcal serotypes and antibiotypes carried by vaccinated and unvaccinated day-care centre attendees in Portugal, a country with widespread use of the seven-valent pneumococcal conjugate vaccine.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Toward a quantitative DNA-based definition of pneumococcal pneumonia: a comparison of Streptococcus pneumoniae target genes, with special reference to the Spn9802 fragment

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Predicted functions and linkage specificities of the products of the Streptococcus pneumoniae capsular biosynthetic loci

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Evaluation and improvement of real-time PCR assays targeting lytA, ply, and psaA genes for detection of pneumococcal DNA.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Genotypic identification of presumptive Streptococcus pneumoniae by PCR using four genes highly specific for S. pneumoniae.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Distribution and genetic diversity of the ABC transporter lipoproteins PiuA and PiaA within Streptococcus pneumoniae and related streptococci.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

An outbreak of conjunctivitis due to atypical Streptococcus pneumoniae

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5627049

Vaccines for preventing pneumococcal infection in adults

18 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1098%2FRSOB.170074

Invasive pneumococcal disease among adults: associations among serotypes, disease characteristics, and outcome

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28931649

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Changes in the composition of the pneumococcal population and in IPD incidence in The Netherlands after the implementation of the 7-valent pneumococcal conjugate vaccine

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28931649

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1098/RSOB.170074

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28931649%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28931649%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

PubMed publication ID

28931649

1 reference