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ThrRS threonine--tRNA ligase [ Chelonus insularis ]

Gene ID: 118072737, updated on 10-Oct-2024

Summary

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Gene symbol
ThrRS
Gene description
threonine--tRNA ligase
See related
EnsemblRapid:LOC118072737
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonus insularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Cheloninae; Chelonus
Orthologs
fruit fly honey bee all
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Genomic context

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See ThrRS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_07 current ASM1335770v1 (GCF_013357705.1) Unplaced Scaffold NW_023276783.1 (2215873..2219015)

NW_023276783.1Genomic Context describing neighboring genes Neighboring gene short spindle 3 Neighboring gene uncharacterized LOC118072843 Neighboring gene LIM1_Isl and LIM2_Isl domain-containing protein tup Neighboring gene UPF0488 protein CG14286 Neighboring gene d4 Neighboring gene Iodotyrosine deiodinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023276783 Unplaced Scaffold Reference ASM1335770v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase 1, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013357705.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1335770v1

Genomic

  1. NW_023276783.1 Reference ASM1335770v1

    Range
    2215873..2219015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035092838.1 → XP_034948729.1  threonine--tRNA ligase 1, cytoplasmic isoform X2

    Related
    XP_034948729.1, XM_035092838.1
    Conserved Domains (1) summary
    PLN02908
    Location:39 → 701
    PLN02908; threonyl-tRNA synthetase

  2. XM_035092837.1 → XP_034948728.1  threonine--tRNA ligase 1, cytoplasmic isoform X1

    Related
    XP_034948728.1, XM_035092837.1
    Conserved Domains (1) summary
    PLN02908
    Location:42 → 704
    PLN02908; threonyl-tRNA synthetase
Nucleotide Protein
Heading Accession and Version

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