Jul 6, 2012 · Sequence clustering methods can directly answer many of the fundamental questions by grouping similar sequences into families.
Sequence clustering methods can directly answer many of the fundamental questions by grouping similar sequences into families. In addition, clustering analysis ...
Oct 19, 2022 · The sequence clustering step was fastest using the UPARSE algorithm with an average 60-fold faster run time than sequence clustering in other ...
Apr 8, 2024 · Clusterize generates higher accuracy and oftentimes much larger clusters than Linclust, a fast linear time clustering algorithm. I demonstrate ...
[PDF] Ultrafast and accurate sequence alignment and clustering of viral ...
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Jul 2, 2024 · Vclust demonstrates superior accuracy and efficiency compared to existing tools, clustering millions of virus genomes in a few hours on a mid- ...
In this article, we propose a highly efficient metagenomic sequence classification (MSC) algorithm that is a hybrid of both approaches.
Aug 28, 2020 · Kraken 2 and Bracken provide a very fast, efficient, and accurate solution for 16S rRNA metataxonomic data analysis.
Ultrafast clustering algorithms for metagenomic sequence analysis. https://doi.org/10.1093/bib/bbs035 · Full text. Journal: Briefings in Bioinformatics, 2012 ...
W. Li et al. Ultrafast clustering algorithms for metagenomic sequence analysis. Briefings in Bioinformatics. (2012).
Ultrafast clustering algorithms for metagenomic sequence analysis. W Li, L Fu, B Niu, S Wu, J Wooley. Briefings in bioinformatics 13 (6), 656-668, 2012. 502 ...