This CH-CDF plot partitions all proteins into 4 groups: structured, mixed, disordered, and rare. Studies of the Protein Data Bank (PDB) entries and homologous show different structural biases for each group classified by the CH-CDF plot.
Here we discuss one approach, the (Charge-Hydropathy) versus (Cumulative Distribution Function) plot or CH-CDF plot, which is based the combined use of the CH ...
[PDF] Subclassifying Disordered Proteins by the CH-CDF Plot Method
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SUBCLASSIFYING DISORDERED PROTEINS BY THE CH-CDF PLOT METHOD. †. FEI HUANG ... One rationale behind using CH-CDF plot in subclassification of disordered proteins ...
To generate a corresponding CH-CDF plot, the coordinates of a query protein are calculated as a distance from the boundary in the CH-plot (Y-coordinate) and an ...
This work discusses one approach, the (Charge-Hydropathy) versus (Cumulative Distribution Function) plot or CH-CDF plot, which is based the combined use of ...
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Jan 24, 2012 · Intrinsically disordered proteins (IDPs) are flexible and lack defined 3D structure under normal physiological conditions.
This work discusses one approach, the (Charge-Hydropathy) versus (Cumulative Distribution Function) plot or CH-CDF plot, which is based the combined use of ...
In addition to creating disorder profiles, RIDAO also performs multinomial classification by creating CH‐CDF plots. These plots along with the underlying CH ...
... method that separates IDPs into different function groups. We used the approach of CH-CDF plot, which is based the combined use of two predictors and ...
The quadrant that the protein is located determines its classification. Q1, protein predicted to be disordered by CH-plot and ordered by CDF. Q2, protein ...