Our work shows that codon usage is linked to the final protein structure and thus possibly to co-translational protein folding.
Dec 8, 2020 · We examine protein groups showing different codon centrality trends, i.e. different relationships between structural positions of the three ...
We perform SCOP domain enrichment analysis for each of the codon usage groups that have more than one protein; for the “at least one centrality” analysis there ...
Jul 7, 2019 · We analyze a protein set recently annotated with codon usage information, considering non-redundant proteins with sufficient structural ...
People also ask
What is synonymous codon usage?
How do you calculate relative synonymous codon usage?
What can the analysis of codon usage help to identify?
What is RSCU codon usage?
CodonO webserver is implemented for synonymous codon usage bias analyses within and across genomes. CodonO measures Synonymous Codon Usage Order (SCUO) in a ...
In this paper, we report the analysis of codon usage bias in begomoviruses and also perform an evolutionary analysis based on their codon usage pattern.
Missing: Network | Show results with:Network
Mar 8, 2023 · In the present study, we analyzed the base bias of 12 mitochondrial core protein-coding genes (PCGs) shared by nine Amanita species.
Missing: Network | Show results with:Network
Feb 12, 2024 · The present study, investigated codon pattern analysis, which might play imperative roles in modulating gene expression of depression-associated genes.
Dec 31, 2020 · Network analysis of synonymous codon usage - Jacob Piland - 3DSIG - ISMB 2020 Posters.
Our work shows that codon usage is linked to the final protein structure and thus possibly to co-translational protein folding. Availability and implementation ...