In this paper we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical ...
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In this paper we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical nucleation- ...
Abstract. In this paper we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical ...
Abstract—In this paper we develop data mining techniques to predict three-dimensional (3-D) contact potentials among protein residues (or amino acids) based ...
Residue–residue contacts (or simply “contacts”) in protein 3-D structures are pairs of spatially close residues. A 3-D structure of a protein is expressed as x, ...
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In this paper, we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical ...
Information of residue-residue contacts is essential for understanding the mechanism of protein folding, and has been successfully applied as special ...
The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or “contact map”.
Contact Map (PDB protein 2igd, length 61). Circles indicate residue contacts, and clusters of circles indicate certain secondary structures. …
Jan 31, 2015 · Here we apply an efficient spatial pattern miner to search for sets of amino acids that occur frequently in close spatial proximity in the protein structures.