Our method relies on the novel and nontrivial adaption and application of spaced seeds in the context of optical mapping, which allows for spurious and deleted ...

Motivation: Optical mapping data is used in many core genomics applications, including structural variation detection, scaffolding assembled ...

Fast and accurate correction of optical mapping data via spaced seeds. Leena Salmela ,. Leena Salmela. Search for other works by this author on: Oxford ...

Our method relies on the novel and nontrivial adaption and application of spaced seeds in the context of optical mapping, which allows for spurious and deleted ...

This corrects the article "Fast and accurate correction of optical mapping data via spaced seeds" on page 682. Bioinformatics (2019) doi:10.1093/bioinformatics/ ...

Oct 22, 2024 · Results: We create an efficient method for determining pairs of Rmaps that contain significant overlaps between them. Our method relies on the ...

This paper proposes a Gaussian mixture modelling clustering based method, which is referred to as OMclust, that finds overlapping Rmaps without quantization.

Fast and accurate correction of optical mapping data via spaced seeds. Salmela, Leena; ;; Mukherjee, Kingshuk; ;; Puglisi, Simon J. ;; Muggli, Martin D.

“Fast and accurate correction of optical mapping data via spaced seeds” is a paper by Leena Salmela Kingshuk Mukherjee Simon J. Puglisi Martin D. Muggli ...

We create an efficient method for determining pairs of Rmaps that contain significant overlaps between them. Our method relies on the novel and nontrivial ...