The MWM method is capable of detecting pseudoknots and other tertiary base-pairing interactions in a computationally efficient manner.
An RNA structure that con- tains base triples may be represented by a construct known as a 2-matching: a graph in which no vertex is connected to more than two ...
Oct 22, 2024 · 1. The MWM RNA folding procedure. Starting with an RNA sequence, a folding graph is formed in which bases are represented by vertices · 2. (a) An ...
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Motivation: Recently, we described a Maximum Weighted Matching (MWM) method for RNA structure prediction. The MWM method is capable of detecting pseudoknots ...
An RNA folding method capable of identifying pseudoknots and base triples. Bioinformatics. 1998;14:691–9. doi: 10.1093/bioinformatics/14.8.691. [DOI] ...
An RNA folding method capable of identifying pseudoknots and base triples. Overview of attention for article published in Bioinformatics, January 1998.
A new algorithm capable of predicting pseudoknots of any topology, ProbKnot, is reported. ProbKnot assembles maximum expected accuracy structures from computed ...
TL;DR: It is suggested that natural mutations in base-triples create structural changes that require compensatory mutations in adjacent base-pairs and triples ...
... An RNA folding method capable of identifying pseudoknots and base triples. Bioinformatics 14(8), 691–699 (1998). Article Google Scholar. Uemura, Y., Hasegawa ...
Handling base triples with bmatch. “An RNA folding method capable of identifying pseudoknots and base triples”, Tabaska et al., Bioinformatics 14 (8) 1998 ...