Mar 6, 2007 · We utilized publicly available data on AMPs to construct hidden Markov models (HMMs) that enable recognition of individual classes of antimicrobials peptides.
Oct 22, 2024 · AMPer: A Database and an Automated Discovery Tool for Antimicrobial Peptides. June 2007; Bioinformatics 23(9):1148-55. DOI:10.1093 ...
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The Antimicrobial Peptide Database (APD) contains 3940 peptides, including 3146 natural antimicrobial peptides (AMPs) from the six life kingdoms.
Missing: automated discovery
AMPer, An automated discovery tool for gene-coded antimicrobial peptides, Canada, 2007. CAMP Prediction, SVM, RF, ANN, or DA prediction of AMPs, India, 2010.
AMPer : A Database and an Automated Discovery Tool for Gene-Coded Antimicrobial Peptides ... LAMP: A Database Linking Antimicrobial Peptides.
The Antimicrobial Peptide Database (APD3), is the commonly used AMP database, which covers more than 2600 AMPs (35). It is difficult to classify natural AMPs ...
Oct 19, 2023 · AMPDB v1 is a meticulously curated resource that aims to address the limitations of existing databases in the field of antimicrobial research.
In this article, we aim to analyze the levels of overlap and diversity for the case of well-known AMP databases and to compile a new non-redundant sequence ...
LAMP, a database linking AMPs, serves as a tool to aid the discovery and design of AMPs as new antimicrobial agents.
ANTIPSEUDOBASE: Database of Antimicrobial Peptides ... Databases and ontologies AMPer: a database and an automated discovery tool for antimicrobial peptides.