In this paper we propose a new sequence comparison algorithm (normalized local alignment) that reports the regions with maximum degree of similarity.
In this paper we propose a new sequence comparison algorithm (normalized local alignment) that reports the regions with maximum degree of similarity. The ...
We consider two alignment-based metrics, Smith-Waterman similarity and Damerau-Levenshtein distance (Table 1), widely adopted to detect protein coding homology ...
In this new approach, human genes are predicted based on other (e.g., mouse) un-annotated genomic sequences. The idea of this method is that similarity between ...
This ingenious dynamic programming approach was designed to reveal the highly conserved fragments by discarding poorly conserved initial and terminal segments.
In this paper we propose a new sequence comparison algorithm (normalized local alignment) ... A New Approach to Sequence Comparison: Normalized Sequence Alignment ...
ABSTRACT. The Smith-Waterman algorithm for lo al sequen e align- ment is one of the most important te hniques in om- putational mole ular biology.
Abdullah N. Arslan, Ömer Egecioglu, Pavel A. Pevzner: A new approach to sequence comparison: normalized sequence alignment. RECOMB 2001: 2-11.
A new algorithm is proposed that can e ciently compute all the optimal sequence local alignments for every normalization function all together and ...
People also ask
What are the 5 main approaches of multiple sequence alignment?
What are the methods of sequence comparison?
What are the methods of sequence alignment?
What is sequence to sequence alignment?
A New Approach to Sequence Comparison: Normalized Sequence Alignment; Ting Chen Gene-Finding via Tandem Mass Spectrometry; Guang Song, Nancy M. Amato Using ...