A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches

Collection of scripts for bacterial genomics

Metagenomic pipeline and other general scripts used in the lab.

a platform for the collection, storage, retrieval, and analysis of experimental data for laboratory workflows

Converts raw phenotypic character information generated by MicroPIE into a coded character matrix (nexus file).