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Illuminating the dark matter of shotgun proteomics

Many of the unassignable spectra in proteomics data represent peptides with post-translational modifications.

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Figure 1: Illustration of the benefits of an open search strategy, as used to identify 184,000 modified peptides.

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Correspondence to Neil L Kelleher.

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Skinner, O., Kelleher, N. Illuminating the dark matter of shotgun proteomics. Nat Biotechnol 33, 717–718 (2015). https://doi.org/10.1038/nbt.3287

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