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ORCIDRiccardo Colombo
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2020 – today
- 2023
[j12]Davide Ottolina, Beatrice Cairo
, Tommaso Fossali, Claudio Mazzucco, Antonio Castelli, Roberto Rech, Emanuele Catena, Alberto Porta, Riccardo Colombo:
Cardiorespiratory coupling in mechanically ventilated patients studied via synchrogram analysis. Medical Biol. Eng. Comput. 61(6): 1329-1341 (2023)- 2022
- [c9]Francesca Gelpi, Vlasta Bari, Beatrice Cairo, Beatrice De Maria, Noemi Cornara, Riccardo Colombo, Alberto Porta:
Derangement of Cardiovascular Regulatory Mechanisms in COVID-19 Patients in Intensive Care Unit and its Association with Mortality. CinC 2022: 1-4 - 2020
- [j11]Davide Maspero, Chiara Damiani, Marco Antoniotti, Alex Graudenzi, Marzia Di Filippo, Marco Vanoni, Giulio Caravagna, Riccardo Colombo, Daniele Ramazzotti, Dario Pescini:
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System. Fundam. Informaticae 171(1-4): 279-295 (2020)
2010 – 2019
- 2019
- [j10]Chiara Damiani, Davide Maspero, Marzia Di Filippo, Riccardo Colombo, Dario Pescini, Alex Graudenzi, Hans V. Westerhoff, Lilia Alberghina, Marco Vanoni, Giancarlo Mauri:
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism. PLoS Comput. Biol. 15(2) (2019) - 2018
- [j9]Riccardo Colombo, Chiara Damiani, David R. Gilbert, Monika Heiner, Giancarlo Mauri, Dario Pescini:
Emerging ensembles of kinetic parameters to characterize observed metabolic phenotypes. BMC Bioinform. 19-S(7): 45-59 (2018) - [j8]Marco S. Nobile, Paolo Cazzaniga, Daniela Besozzi, Riccardo Colombo, Giancarlo Mauri, Gabriella Pasi:
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization. Swarm Evol. Comput. 39: 70-85 (2018) - 2017
- [j7]Chiara Damiani, Marzia Di Filippo, Dario Pescini, Davide Maspero, Riccardo Colombo, Giancarlo Mauri:
popFBA: tackling intratumour heterogeneity with Flux Balance Analysis. Bioinform. 33(14): i311-i318 (2017) - [j6]Chiara Damiani, Riccardo Colombo, Daniela Gaglio, Fabrizia Mastroianni, Dario Pescini, Hans V. Westerhoff, Giancarlo Mauri, Marco Vanoni, Lilia Alberghina:
A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: The WarburQ effect. PLoS Comput. Biol. 13(9) (2017) - [j5]Alberto Porta, Vlasta Bari, Beatrice De Maria, Anielle C. M. Takahashi, Stefano Guzzetti, Riccardo Colombo, Aparecida Maria Catai, Ferdinando Raimondi, Luca Faes:
Quantifying Net Synergy/Redundancy of Spontaneous Variability Regulation via Predictability and Transfer Entropy Decomposition Frameworks. IEEE Trans. Biomed. Eng. 64(11): 2628-2638 (2017) - [c8]Luca Terruzzi, Riccardo Colombo, Michele Segata:
Poster: On the effects of cooperative platooning on traffic shock waves. VNC 2017: 37-38 - 2016
- [j4]Marzia Di Filippo, Riccardo Colombo, Chiara Damiani, Dario Pescini, Daniela Gaglio, Marco Vanoni, Lilia Alberghina, Giancarlo Mauri:
Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models. Comput. Biol. Chem. 62: 60-69 (2016) - [c7]Fabio Cumbo, Marco S. Nobile, Chiara Damiani, Riccardo Colombo, Giancarlo Mauri, Paolo Cazzaniga:
COSYS: A Computational Infrastructure for Systems Biology. CIBB 2016: 82-92 - [c6]Riccardo Colombo, Chiara Damiani, Giancarlo Mauri, Dario Pescini:
Constraining Mechanism Based Simulations to Identify Ensembles of Parametrizations to Characterize Metabolic Features. CIBB 2016: 107-117 - [c5]Marzia Di Filippo, Chiara Damiani, Riccardo Colombo, Dario Pescini, Giancarlo Mauri:
Constraint-Based Modeling and Simulation of Cell Populations. WIVACE 2016: 126-137 - [c4]Chiara Damiani, Riccardo Colombo, Marzia Di Filippo, Dario Pescini, Giancarlo Mauri:
Linking Alterations in Metabolic Fluxes with Shifts in Metabolite Levels by Means of Kinetic Modeling. WIVACE 2016: 138-148 - 2015
- [j3]Ettore Murabito, Riccardo Colombo, Chengkun Wu, Malkhey Verma, Samrina Rehman, Jacky L. Snoep, Shaoliang Peng, Naiyang Guan, Xiangke Liao, Hans V. Westerhoff:
SupraBiology 2014: Promoting UK-China collaboration on Systems Biology and High Performance Computing. Quant. Biol. 3(1): 46-53 (2015) - [c3]Marco S. Nobile, Gabriella Pasi, Paolo Cazzaniga, Daniela Besozzi, Riccardo Colombo, Giancarlo Mauri:
Proactive Particles in Swarm Optimization: A self-tuning algorithm based on Fuzzy Logic. FUZZ-IEEE 2015: 1-8 - 2014
- [j2]Chiara Damiani, Dario Pescini, Riccardo Colombo, Sara Molinari, Lilia Alberghina, Marco Vanoni, Giancarlo Mauri:
An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes. Nat. Comput. 13(3): 321-331 (2014) - [c2]Alberto Porta, Andrea Marchi, Vlasta Bari, Aparecida Maria Catai, Stefano Guzzetti, Ferdinando Raimondi, Riccardo Colombo:
Directionality in cardiovascular variability interactions during head-down tilt test. EMBC 2014: 6008-6011 - 2013
- [j1]Flavio Amara, Riccardo Colombo, Paolo Cazzaniga, Dario Pescini, Attila Csikász-Nagy, Marco Falconi, Daniela Besozzi, Paolo Plevani:
In vivo and in silico analysis of PCNA ubiquitylation in the activation of the Post Replication Repair pathway in S. cerevisiae. BMC Syst. Biol. 7: 24 (2013) - [c1]Chiara Damiani, Riccardo Colombo, Sara Molinari, Dario Pescini, Daniela Gaglio, Marco Vanoni, Lilia Alberghina, Giancarlo Mauri:
An ensemble approach to the study of the emergence of metabolic and proliferative disorders via Flux Balance Analysis. WIVACE 2013: 92-97
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