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22nd CPM 2011: Palermo, Italy
- Raffaele Giancarlo, Giovanni Manzini:
Combinatorial Pattern Matching - 22nd Annual Symposium, CPM 2011, Palermo, Italy, June 27-29, 2011. Proceedings. Lecture Notes in Computer Science 6661, Springer 2011, ISBN 978-3-642-21457-8
Invited Talks
- Gad M. Landau:
Algorithms on Grammar-Compressed Strings. 1 - Nello Cristianini:
Automatic Discovery of Patterns in Media Content. 2-13 - Martin Vingron:
Computational Regulatory Genomics. 14
Contributed Papers
- Enno Ohlebusch, Simon Gog:
Lempel-Ziv Factorization Revisited. 15-26 - Chris Thachuk:
Succincter Text Indexing with Wildcards. 27-40 - Sebastian Kreft, Gonzalo Navarro:
Self-indexing Based on LZ77. 41-54 - Haitao Jiang, Farong Zhong, Binhai Zhu:
Filling Scaffolds with Gene Repetitions: Maximizing the Number of Adjacencies. 55-64 - David E. Daykin, Jacqueline W. Daykin, William F. Smyth:
String Comparison and Lyndon-Like Factorization Using V-Order in Linear Time. 65-76 - Antoine Deza, Frantisek Franek, Mei Jiang:
A d-Step Approach for Distinct Squares in Strings. 77-89 - Cédric Chauve, Ján Manuch, Murray Patterson, Roland Wittler:
Tractability Results for the Consecutive-Ones Property with Multiplicity. 90-103 - Stefanie Schirmer, Robert Giegerich:
Forest Alignment with Affine Gaps and Anchors. 104-117 - Wolfgang Otto, Peter F. Stadler, Sonja J. Prohaska:
Phylogenetic Footprinting and Consistent Sets of Local Aligments. 118-131 - Michel Habib, Juraj Stacho:
Unique Perfect Phylogeny Is NP-Hard. 132-146 - Daniel Gregory Brown, Jakub Truszkowski:
Fast Error-Tolerant Quartet Phylogeny Algorithms. 147-161 - Dany Breslauer, Zvi Galil:
Real-Time Streaming String-Matching. 162-172 - Dany Breslauer, Roberto Grossi, Filippo Mignosi:
Simple Real-Time Constant-Space String Matching. 173-183 - Raphaël Clifford, Markus Jalsenius, Ely Porat, Benjamin Sach:
Space Lower Bounds for Online Pattern Matching. 184-196 - Travis Gagie, Juha Kärkkäinen:
Counting Colours in Compressed Strings. 197-207 - German Tischler:
On Wavelet Tree Construction. 208-218 - Markus J. Bauer, Anthony J. Cox, Giovanna Rosone:
Lightweight BWT Construction for Very Large String Collections. 219-231 - Tomohiro I, Shunsuke Inenaga, Masayuki Takeda:
Palindrome Pattern Matching. 232-245 - Takashi Uemura, Hiroki Arimura:
Sparse and Truncated Suffix Trees on Variable-Length Codes. 246-260 - Paolo Ferragina:
On the Weak Prefix-Search Problem. 261-272 - Isaac Goldstein, Moshe Lewenstein:
Quick Greedy Computation for Minimum Common String Partitions. 273-284 - Jérémy Barbay, Johannes Fischer, Gonzalo Navarro:
LRM-Trees: Compressed Indices, Adaptive Sorting, and Compressed Permutations. 285-298 - Philip Bille, Inge Li Gørtz:
Substring Range Reporting. 299-308 - Takanori Yamamoto, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda:
Faster Subsequence and Don't-Care Pattern Matching on Compressed Texts. 309-322 - Yassin Refahi, Etienne Farcot, Yann Guédon, Fabrice Besnard, Teva Vernoux, Christophe Godin:
A Combinatorial Model of Phyllotaxis Perturbations in Arabidopsis thaliana. 323-335 - Laurent Bulteau, Guillaume Fertin, Minghui Jiang, Irena Rusu:
Tractability and Approximability of Maximal Strip Recovery. 336-349 - Michalis Christou, Maxime Crochemore, Costas S. Iliopoulos, Marcin Kubica, Solon P. Pissis, Jakub Radoszewski, Wojciech Rytter, Bartosz Szreder, Tomasz Walen:
Efficient Seeds Computation Revisited. 350-363 - Domenico Cantone, Salvatore Cristofaro, Simone Faro:
Efficient Matching of Biological Sequences Allowing for Non-overlapping Inversions. 364-375 - Jesper Nielsen:
A Coarse-to-Fine Approach to Computing the k-Best Viterbi Paths. 376-387 - Riccardo Dondi, Guillaume Fertin, Stéphane Vialette:
Finding Approximate and Constrained Motifs in Graphs. 388-401 - Kouichi Hirata, Yoshiyuki Yamamoto, Tetsuji Kuboyama:
Improved MAX SNP-Hard Results for Finding an Edit Distance between Unordered Trees. 402-415 - Michael Elberfeld, Danny Segev, Colin R. Davidson, Dana Silverbush, Roded Sharan:
Approximation Algorithms for Orienting Mixed Graphs. 416-428 - Stéphane Gosselin, Guillaume Damiand, Christine Solnon:
Frequent Submap Discovery. 429-440 - Tamar Pinhas, Dekel Tsur, Shay Zakov, Michal Ziv-Ukelson:
Edit Distance with Duplications and Contractions Revisited. 441-454 - Marek Cygan, Marcin Kubica, Jakub Radoszewski, Wojciech Rytter, Tomasz Walen:
Polynomial-Time Approximation Algorithms for Weighted LCS Problem. 455-466 - Raphaël Clifford, Zvi Gotthilf, Moshe Lewenstein, Alexandru Popa:
Restricted Common Superstring and Restricted Common Supersequence. 467-478
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