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2020 – today
- 2024
[j143]Ruisheng Su
, Matthijs van der Sluijs, Yuan Chen, Sandra A. P. Cornelissen, Ruben van den Broek, Wim H. van Zwam, Aad van der Lugt, Wiro J. Niessen, Danny Ruijters, Theo van Walsum:
CAVE: Cerebral artery-vein segmentation in digital subtraction angiography. Comput. Medical Imaging Graph. 115: 102392 (2024)- [d2]Wietske A. P. Bastiaansen, Melek Rousian, Anton H. J. Koning, Wiro J. Niessen, Bernadette de Bakker, Régine P. M. Steegers-Theunissen, Stefan Klein:
The 4D Human Embryonic Brain Atlas. Zenodo, 2024
- [i37]Sijie Liu, Ruisheng Su, Jianghang Su, Jingmin Xin, Jiayi Wu, Wim H. van Zwam, Pieter Jan van Doormaal, Aad van der Lugt, Wiro J. Niessen, Nanning Zheng, Theo van Walsum:
An automated framework for brain vessel centerline extraction from CTA images. CoRR abs/2401.07041 (2024) - [i36]Douwe J. Spaanderman, Martijn P. A. Starmans, Gonnie C. M. van Erp, David F. Hanff, Judith H. Sluijter, Anne-Rose W. Schut, Geert J. L. H. van Leenders, Cornelis Verhoef, Dirk J. Grünhagen, Wiro J. Niessen, Jacob J. Visser, Stefan Klein:
Minimally Interactive Segmentation of Soft-Tissue Tumors on CT and MRI using Deep Learning. CoRR abs/2402.07746 (2024) - [i35]Douwe J. Spaanderman, Matthew Marzetti, Xinyi Wan, Andrew F. Scarsbrook, Philip Robinson, Edwin H. G. Oei, Jacob J. Visser, Robert Hemke, Kirsten van Langevelde, David F. Hanff, Geert J. L. H. van Leenders, Cornelis Verhoef, Dirk J. Gruühagen, Wiro J. Niessen, Stefan Klein, Martijn P. A. Starmans:
AI in radiological imaging of soft-tissue and bone tumours: a systematic review evaluating against CLAIM and FUTURE-AI guidelines. CoRR abs/2408.12491 (2024) - 2023
- [j142]Sijie Liu, Jingmin Xin, Jiayi Wu, Yangyang Deng, Ruisheng Su, Wiro J. Niessen, Nanning Zheng, Theo van Walsum:
Multi-view Contour-constrained Transformer Network for Thin-cap Fibroatheroma Identification. Neurocomputing 523: 224-234 (2023) - [j141]Jiahang Su, Shuai Li, Lennard Wolff, Wim H. van Zwam, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum:
Deep reinforcement learning for cerebral anterior vessel tree extraction from 3D CTA images. Medical Image Anal. 84: 102724 (2023) - [j140]Mohamed Benmahdjoub, Abdullah Thabit, Marie-Lise C. van Veelen, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum:
Evaluation of AR visualization approaches for catheter insertion into the ventricle cavity. IEEE Trans. Vis. Comput. Graph. 29(5): 2434-2445 (2023) - [c189]Mohamed Benmahdjoub, Abdullah Thabit, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum:
Fiducial markers detection trained exclusively on synthetic data for image-to-patient alignment in HMD-based surgical navigation. ISMAR-Adjunct 2023: 429-434 - [c188]Ruisheng Su, Matthijs van der Sluijs, Sandra A. P. Cornelissen, Wim H. van Zwam, Aad van der Lugt, Wiro J. Niessen, Danny Ruijters, Theo van Walsum, Adrian V. Dalca:
AngioMoCo: Learning-Based Motion Correction in Cerebral Digital Subtraction Angiography. MICCAI (7) 2023: 770-780 - [i34]Bo Li, Jeroen de Bresser, Wiro J. Niessen, Matthias van Osch, Wiesje M. van der Flier, Geert Jan Biessels, Meike W. Vernooij, Esther Bron:
Prior-knowledge-informed deep learning for lacune detection and quantification using multi-site brain MRI. CoRR abs/2306.10622 (2023) - [i33]Ruisheng Su, Matthijs van der Sluijs, Sandra A. P. Cornelissen, Wim H. van Zwam, Aad van der Lugt, Wiro J. Niessen, Danny Ruijters, Theo van Walsum, Adrian V. Dalca:
AngioMoCo: Learning-based Motion Correction in Cerebral Digital Subtraction Angiography. CoRR abs/2310.05445 (2023) - 2022
- [j139]Abdullah Thabit, Mohamed Benmahdjoub, Marie-Lise C. van Veelen, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum:
Augmented reality navigation for minimally invasive craniosynostosis surgery: a phantom study. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1453-1460 (2022) - [j138]Martijn P. A. Starmans, Milea J. M. Timbergen, Melissa Vos, Michel Renckens, Dirk J. Grünhagen, Geert J. L. H. van Leenders, Roy S. Dwarkasing, François E. J. A. Willemssen, Wiro J. Niessen, Cornelis Verhoef, Stefan Sleijfer, Jacob J. Visser, Stefan Klein:
Differential Diagnosis and Molecular Stratification of Gastrointestinal Stromal Tumors on CT Images Using a Radiomics Approach. J. Digit. Imaging 35(2): 127-136 (2022) - [j137]Ruisheng Su, Matthijs van der Sluijs, Sandra A. P. Cornelissen, Geert J. Lycklama, Jeannette Hofmeijer, Charles B. L. M. Majoie, Pieter Jan van Doormaal, Adriaan C. G. M. van Es, Danny Ruijters, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum:
Spatio-temporal deep learning for automatic detection of intracranial vessel perforation in digital subtraction angiography during endovascular thrombectomy. Medical Image Anal. 77: 102377 (2022) - [j136]Mohamed Benmahdjoub, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum:
Multimodal markers for technology-independent integration of augmented reality devices and surgical navigation systems. Virtual Real. 26(4): 1637-1650 (2022) - [c187]Abdullah Thabit, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum:
Evaluation of marker tracking using mono and stereo vision in Microsoft HoloLens for surgical navigation. Medical Imaging: Image-Guided Procedures 2022 - [c186]Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein:
Towards a 4D Spatio-Temporal Atlas of the Embryonic and Fetal Brain Using a Deep Learning Approach for Groupwise Image Registration. WBIR 2022: 29-34 - [i32]Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein:
Multi-Atlas Segmentation and Spatial Alignment of the Human Embryo in First Trimester 3D Ultrasound. CoRR abs/2202.06599 (2022) - [i31]Vikram Venkatraghavan, Sebastian R. van der Voort, Daniel Bos, Marion Smits, Frederik Barkhof, Wiro J. Niessen, Stefan Klein, Esther E. Bron:
Computer-aided diagnosis and prediction in brain disorders. CoRR abs/2206.14683 (2022) - 2021
- [j135]Wyke Huizinga, Dirk H. J. Poot, Elisabeth J. Vinke, F. Wenzel, Esther Bron, N. Toussaint, Christian Ledig, Henri A. Vrooman, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Stefan Klein:
Differences Between MR Brain Region Segmentation Methods: Impact on Single-Subject Analysis. Frontiers Big Data 4: 577164 (2021) - [j134]Emanoel R. Sabidussi, Stefan Klein, Matthan W. A. Caan, Shabab Bazrafkan, Arnold J. den Dekker, Jan Sijbers, Wiro J. Niessen, Dirk H. J. Poot:
Recurrent inference machines as inverse problem solvers for MR relaxometry. Medical Image Anal. 74: 102220 (2021) - [j133]Vikram Venkatraghavan, Stefan Klein, Lana Fani, Leontine S. Ham, Henri A. Vrooman, M. Kamran Ikram, Wiro J. Niessen, Esther E. Bron:
Analyzing the effect of APOE on Alzheimer's disease progression using an event-based model for stratified populations. NeuroImage 227: 117646 (2021) - [j132]Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron:
Longitudinal diffusion MRI analysis using Segis-Net: A single-step deep-learning framework for simultaneous segmentation and registration. NeuroImage 235: 118004 (2021) - [j131]Vikram Venkatraghavan, Elisabeth J. Vinke, Esther E. Bron, Wiro J. Niessen, Mohammad Arfan Ikram, Stefan Klein, Meike W. Vernooij:
Progression along data-driven disease timelines is predictive of Alzheimer's disease in a population-based cohort. NeuroImage 238: 118233 (2021) - [j130]Ruisheng Su, Sandra A. P. Cornelissen, Matthijs van der Sluijs, Adriaan C. G. M. van Es, Wim H. van Zwam, Diederik W. J. Dippel, Geert J. Lycklama, Pieter Jan van Doormaal, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum:
autoTICI: Automatic Brain Tissue Reperfusion Scoring on 2D DSA Images of Acute Ischemic Stroke Patients. IEEE Trans. Medical Imaging 40(9): 2380-2391 (2021) - [j129]Mohamed Benmahdjoub, Wiro J. Niessen, Eppo B. Wolvius, Theo van Walsum:
Virtual extensions improve perception-based instrument alignment using optical see-through devices. IEEE Trans. Vis. Comput. Graph. 27(11): 4332-4341 (2021) - [c185]Xianjing Liu, Bo Li, Esther E. Bron, Wiro J. Niessen, Eppo B. Wolvius, Gennady V. Roshchupkin:
Projection-Wise Disentangling for Fair and Interpretable Representation Learning: Application to 3D Facial Shape Analysis. MICCAI (5) 2021: 814-823 - [c184]Bo Li, Wiro J. Niessen, Stefan Klein, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron:
Learning unbiased group-wise registration (LUGR) and joint segmentation: evaluation on longitudinal diffusion MRI. Medical Imaging: Image Processing 2021 - [d1]Arno van Hilten, Steven A. Kushner, Manfred Kayser, Mohammad Arfan Ikram, Hieab H. H. Adams, Caroline C. W. Klaver, Wiro J. Niessen, Gennady V. Roshchupkin:
ArnovanHilten/GenNet: Release GenNet 1.4. Zenodo, 2021 - [i30]Emanoel R. Sabidussi, Stefan Klein, Matthan W. A. Caan, Shabab Bazrafkan, Arnold J. den Dekker, Jan Sijbers, Wiro J. Niessen, Dirk H. J. Poot:
Recurrent Inference Machines as inverse problem solvers for MR relaxometry. CoRR abs/2106.07379 (2021) - [i29]Xianjing Liu, Bo Li, Esther Bron, Wiro J. Niessen, Eppo B. Wolvius, Gennady Roshchupkin:
Projection-wise Disentangling for Fair and Interpretable Representation Learning: Application to 3D Facial Shape Analysis. CoRR abs/2106.13734 (2021) - [i28]Martijn P. A. Starmans, Sebastian R. van der Voort, Thomas Phil, Milea J. M. Timbergen, Melissa Vos, Guillaume A. Padmos, Wouter Kessels, David Hanff, Dirk J. Grünhagen, Cornelis Verhoef, Stefan Sleijfer, Martin J. van den Bent, Marion Smits, Roy S. Dwarkasing, Christopher J. Els, Federico Fiduzi, Geert J. L. H. van Leenders, Anela Blazevic, Johannes Hofland, Tessa Brabander, Renza A. H. van Gils, Gaston J. H. Franssen, Richard A. Feelders, Wouter W. de Herder, Florian E. Buisman, François E. J. A. Willemssen, Bas Groot Koerkamp, Lindsay Angus, Astrid A. M. van der Veldt, Ana Rajicic, Arlette E. Odink, Mitchell Deen, Jose M. Castillo T, Jifke F. Veenland, Ivo Schoots, Michel Renckens, Michail Doukas, Rob A. de Man, Jan N. M. IJzermans, Razvan L. Miclea, Peter B. Vermeulen, Esther E. Bron, Maarten G. Thomeer, Jacob J. Visser, Wiro J. Niessen, Stefan Klein:
Reproducible radiomics through automated machine learning validated on twelve clinical applications. CoRR abs/2108.08618 (2021) - 2020
- [j128]Florian Dubost, Marleen de Bruijne, Marco Nardin, Adrian V. Dalca, Kathleen L. Donahue, Anne-Katrin Giese, Mark R. Etherton, Ona Wu, Marius de Groot, Wiro J. Niessen, Meike W. Vernooij, Natalia S. Rost, Markus D. Schirmer:
Multi-atlas image registration of clinical data with automated quality assessment using ventricle segmentation. Medical Image Anal. 63: 101698 (2020) - [j127]Florian Dubost, Hieab Adams, Pinar Yilmaz, Gerda Bortsova, Gijs van Tulder, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Weakly supervised object detection with 2D and 3D regression neural networks. Medical Image Anal. 65: 101767 (2020) - [j126]Hayit Greenspan, Raúl San José Estépar, Wiro J. Niessen, Eliot L. Siegel, Mads Nielsen:
Position paper on COVID-19 imaging and AI: From the clinical needs and technological challenges to initial AI solutions at the lab and national level towards a new era for AI in healthcare. Medical Image Anal. 66: 101800 (2020) - [j125]Bo Li, Marius de Groot, Rebecca M. E. Steketee, Rozanna Meijboom, Marion Smits, Meike W. Vernooij, Mohammad Arfan Ikram, Jiren Liu, Wiro J. Niessen, Esther E. Bron:
Neuro4Neuro: A neural network approach for neural tract segmentation using large-scale population-based diffusion imaging. NeuroImage 218: 116993 (2020) - [j124]Yaron Caspi, Rachel M. Brouwer, Hugo G. Schnack, Marieke E. van de Nieuwenhuijzen, Wiepke Cahn, René S. Kahn, Wiro J. Niessen, Aad van der Lugt, Hilleke E. Hulshoff Pol:
Changes in the intracranial volume from early adulthood to the sixth decade of life: A longitudinal study. NeuroImage 220: 116842 (2020) - [j123]Hakim C. Achterberg, Johan J. de Rooi, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Paul H. C. Eilers, Marleen de Bruijne:
Spatially Regularized Shape Analysis of the Hippocampus Using P-Spline Based Shape Regression. IEEE J. Biomed. Health Informatics 24(3): 825-834 (2020) - [j122]Georgius A. M. Arkesteijn, Dirk H. J. Poot, Mohammad Arfan Ikram, Wiro J. Niessen, Lucas J. van Vliet, Meike W. Vernooij, Frans M. Vos:
Orientation Prior and Consistent Model Selection Increase Sensitivity of Tract-Based Spatial Statistics in Crossing-Fiber Regions. IEEE Trans. Medical Imaging 39(2): 308-319 (2020) - [j121]Jiahang Su, Lennard Wolff, Adriaan C. G. M. van Es, Wim H. van Zwam, Charles B. L. M. Majoie, Diederik W. J. Dippel, Aad van der Lugt, Wiro J. Niessen, Theo van Walsum:
Automatic Collateral Scoring From 3D CTA Images. IEEE Trans. Medical Imaging 39(6): 2190-2200 (2020) - [c183]Muhammad Arif, Ivo G. Schoots, Jose M. Castillo T, Monique J. Roobol, Wiro J. Niessen, Jifke F. Veenland:
Computer Aided Diagnosis of Clinically Significant Prostate Cancer in Low-Risk Patients on Multi-Parametric MR Images Using Deep Learning. ISBI 2020: 1482-1485 - [c182]Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein:
Atlas-Based Segmentation of the Human Embryo Using Deep Learning with Minimal Supervision. ASMUS/PIPPI@MICCAI 2020: 211-221 - [c181]Yuanyuan Sun, Taygun Kekec, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum:
Transformation optimization and image blending for 3D liver ultrasound series stitching. Medical Imaging: Image-Guided Procedures 2020: 1131512 - [c180]Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein:
Towards Segmentation and Spatial Alignment of the Human Embryonic Brain Using Deep Learning for Atlas-Based Registration. WBIR 2020: 34-43 - [i27]Oliver Werner, Kimberlin M. H. van Wijnen, Wiro J. Niessen, Marius de Groot, Meike W. Vernooij, Florian Dubost, Marleen de Bruijne:
When Weak Becomes Strong: Robust Quantification of White Matter Hyperintensities in Brain MRI scans. CoRR abs/2004.05578 (2020) - [i26]Wietske A. P. Bastiaansen, Melek Rousian, Régine P. M. Steegers-Theunissen, Wiro J. Niessen, Anton H. J. Koning, Stefan Klein:
Towards segmentation and spatial alignment of the human embryonic brain using deep learning for atlas-based registration. CoRR abs/2005.06368 (2020) - [i25]Bo Li, Marius de Groot, Rebecca M. E. Steketee, Rozanna Meijboom, Marion Smits, Meike W. Vernooij, Mohammad Arfan Ikram, Jiren Liu, Wiro J. Niessen, Esther E. Bron:
Neuro4Neuro: A neural network approach for neural tract segmentation using large-scale population-based diffusion imaging. CoRR abs/2005.12838 (2020) - [i24]Vikram Venkatraghavan, Stefan Klein, Lana Fani, Leontine S. Ham, Henri A. Vrooman, M. Kamran Ikram, Wiro J. Niessen, Esther E. Bron:
Analyzing the effect of APOE on Alzheimer's disease progression using an event-based model for stratified populations. CoRR abs/2009.07139 (2020) - [i23]Ruisheng Su, Sandra A. P. Cornelissen, Matthijs van der Sluijs, Adriaan C. G. M. van Es, Wim H. van Zwam, Diederik W. J. Dippel, Geert J. Lycklama, Pieter Jan van Doormaal, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum:
autoTICI: Automatic Brain Tissue Reperfusion Scoring on 2D DSA Images of Acute Ischemic Stroke Patients. CoRR abs/2010.01432 (2020) - [i22]Sebastian R. van der Voort, Fatih Incekara, Maarten M. J. Wijnenga, Georgios Kapsas, Renske Gahrmann, Joost W. Schouten, Rishi Nandoe Tewarie, Geert J. Lycklama, Philip C. de Witt Hamer, Roelant S. Eijgelaar, Pim J. French, Hendrikus J. Dubbink, Arnaud J. P. E. Vincent, Wiro J. Niessen, Martin J. van den Bent, Marion Smits, Stefan Klein:
WHO 2016 subtyping and automated segmentation of glioma using multi-task deep learning. CoRR abs/2010.04425 (2020) - [i21]Martijn P. A. Starmans, Milea J. M. Timbergen, Melissa Vos, Michel Renckens, Dirk J. Grünhagen, Geert J. L. H. van Leenders, Roy S. Dwarkasing, François E. J. A. Willemssen, Wiro J. Niessen, Cornelis Verhoef, Stefan Sleijfer, Jacob J. Visser, Stefan Klein:
Differential diagnosis and molecular stratification of gastrointestinal stromal tumors on CT images using a radiomics approach. CoRR abs/2010.06824 (2020) - [i20]Bo Li, Wiro J. Niessen, Stefan Klein, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron:
Learning unbiased registration and joint segmentation: evaluation on longitudinal diffusion MRI. CoRR abs/2011.01869 (2020) - [i19]Esther E. Bron, Stefan Klein, Janne M. Papma, Lize C. Jiskoot, Vikram Venkatraghavan, Jara Linders, Pauline Aalten, Peter Paul De Deyn, Geert Jan Biessels, Jurgen A. H. R. Claassen, Huub A. M. Middelkoop, Marion Smits, Wiro J. Niessen, John van Swieten, Wiesje M. van der Flier, Inez H. G. B. Ramakers, Aad van der Lugt:
Cross-Cohort Generalizability of Deep and Conventional Machine Learning for MRI-based Diagnosis and Prediction of Alzheimer's Disease. CoRR abs/2012.08769 (2020) - [i18]Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron:
Longitudinal diffusion MRI analysis using Segis-Net: a single-step deep-learning framework for simultaneous segmentation and registration. CoRR abs/2012.14230 (2020)
2010 – 2019
- 2019
- [j120]Florian Dubost, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
3D regression neural network for the quantification of enlarged perivascular spaces in brain MRI. Medical Image Anal. 51: 89-100 (2019) - [j119]Jyotirmoy Banerjee, Yuanyuan Sun, Camiel Klink, Renske Gahrmann, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
Multiple-correlation similarity for block-matching based fast CT to ultrasound registration in liver interventions. Medical Image Anal. 53: 132-141 (2019) - [j118]Florian Dubost, Pinar Yilmaz, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Enlarged perivascular spaces in brain MRI: Automated quantification in four regions. NeuroImage 185: 534-544 (2019) - [j117]Vikram Venkatraghavan, Esther E. Bron, Wiro J. Niessen, Stefan Klein:
Disease progression timeline estimation for Alzheimer's disease using discriminative event based modeling. NeuroImage 186: 518-532 (2019) - [j116]Hazel I. Zonneveld, Raimon H. R. Pruim, Daniel Bos, Henri A. Vrooman, Ryan L. Muetzel, Albert Hofman, Serge A. R. B. Rombouts, Aad van der Lugt, Wiro J. Niessen, Mohammad Arfan Ikram, Meike W. Vernooij:
Patterns of functional connectivity in an aging population: The Rotterdam Study. NeuroImage 189: 432-444 (2019) - [j115]Natalia Vilor-Tejedor, Mohammad Arfan Ikram, Gennady V. Roshchupkin, Alejandro Cáceres, Silvia Alemany, Meike W. Vernooij, Wiro J. Niessen, Cornelia M. van Duijn, Jordi Sunyer, Hieab H. Adams, Juan R. González:
Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics. Neuroinformatics 17(4): 583-592 (2019) - [j114]Neda Jahanshad, Joshua Faskowitz, Gennady V. Roshchupkin, Derrek P. Hibar, Boris A. Gutman, Nicholas J. Tustison, Hieab H. H. Adams, Wiro J. Niessen, Meike W. Vernooij, Mohammad Arfan Ikram, Marcel P. Zwiers, Alejandro Arias-Vasquez, Barbara Franke, Jennifer L. Kroll, Benson Mwangi, Jair C. Soares, Alex Ing, Sylvane Desrivières, Gunter Schumann, Narelle K. Hansell, Greig I. de Zubicaray, Katie L. McMahon, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson:
Multi-Site Meta-Analysis of Morphometry. IEEE ACM Trans. Comput. Biol. Bioinform. 16(5): 1508-1514 (2019) - [j113]Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Dirk H. J. Poot, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein:
Groupwise Multichannel Image Registration. IEEE J. Biomed. Health Informatics 23(3): 1171-1180 (2019) - [c179]Vikram Venkatraghavan, Florian Dubost, Esther E. Bron, Wiro J. Niessen, Marleen de Bruijne, Stefan Klein:
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia. IPMI 2019: 169-180 - [c178]Gerard Snaauw, Dong Gong, Gabriel Maicas, Anton van den Hengel, Wiro J. Niessen, Johan Verjans, Gustavo Carneiro:
End-To-End Diagnosis And Segmentation Learning From Cardiac Magnetic Resonance Imaging. ISBI 2019: 802-805 - [c177]Jose M. Castillo T, Martijn P. A. Starmans, Wiro J. Niessen, Ivo Schoots, Stefan Klein, Jifke F. Veenland:
Classification Of Prostate Cancer: High Grade Versus Low Grade Using A Radiomics Approach. ISBI 2019: 1319-1322 - [c176]Florian Dubost, Benjamin Collery, Antonin Renaudier, Axel Roc, Nicolas Posocco, Wiro J. Niessen, Marleen de Bruijne:
Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. CSI@MICCAI 2019: 88-94 - [c175]Florian Dubost, Max Dünnwald, Denver Huff, Vincent Scheumann, Frank Schreiber, Meike W. Vernooij, Wiro J. Niessen, Martin Skalej, Stefanie Schreiber, Steffen Oeltze-Jafra, Marleen de Bruijne:
Automated Quantification of Enlarged Perivascular Spaces in Clinical Brain MRI Across Sites. OR/MLCN@MICCAI 2019: 103-111 - [c174]Kimberlin M. H. van Wijnen, Florian Dubost, Pinar Yilmaz, Mohammad Arfan Ikram, Wiro J. Niessen, Hieab Adams, Meike W. Vernooij, Marleen de Bruijne:
Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network. MICCAI (4) 2019: 234-242 - [c173]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Hydranet: Data Augmentation for Regression Neural Networks. MICCAI (4) 2019: 438-446 - [c172]Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther E. Bron:
A Hybrid Deep Learning Framework for Integrated Segmentation and Registration: Evaluation on Longitudinal White Matter Tract Changes. MICCAI (3) 2019: 645-653 - [i17]Vikram Venkatraghavan, Florian Dubost, Esther E. Bron, Wiro J. Niessen, Marleen de Bruijne, Stefan Klein:
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia. CoRR abs/1903.03386 (2019) - [i16]Florian Dubost, Hieab Adams, Pinar Yilmaz, Gerda Bortsova, Gijs van Tulder, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Weakly Supervised Object Detection with 2D and 3D Regression Neural Networks. CoRR abs/1906.01891 (2019) - [i15]Florian Dubost, Marleen de Bruijne, Marco Nardin, Adrian V. Dalca, Kathleen L. Donahue, Anne-Katrin Giese, Mark R. Etherton, Ona Wu, Marius de Groot, Wiro J. Niessen, Meike W. Vernooij, Natalia S. Rost, Markus D. Schirmer:
Automated Image Registration Quality Assessment Utilizing Deep-learning based Ventricle Extraction in Clinical Data. CoRR abs/1907.00695 (2019) - [i14]Kimberlin M. H. van Wijnen, Florian Dubost, Pinar Yilmaz, Mohammad Arfan Ikram, Wiro J. Niessen, Hieab Adams, Meike W. Vernooij, Marleen de Bruijne:
Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network. CoRR abs/1907.12452 (2019) - [i13]Bo Li, Marius de Groot, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Esther Bron:
Reproducible White Matter Tract Segmentation Using 3D U-Net on a Large-scale DTI Dataset. CoRR abs/1908.10219 (2019) - [i12]Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, Mohammad Arfan Ikram, Meike W. Vernooij, Esther Bron:
A hybrid deep learning framework for integrated segmentation and registration: evaluation on longitudinal white matter tract changes. CoRR abs/1908.10221 (2019) - [i11]Florian Dubost, Benjamin Collery, Antonin Renaudier, Axel Roc, Nicolas Posocco, Gerda Bortsova, Wiro J. Niessen, Marleen de Bruijne:
Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. CoRR abs/1911.01126 (2019) - 2018
- [j112]Mathias Polfliet, Stefan Klein, Wyke Huizinga, Margarethus M. Paulides, Wiro J. Niessen, Jef Vandemeulebroucke:
Intrasubject multimodal groupwise registration with the conditional template entropy. Medical Image Anal. 46: 15-25 (2018) - [j111]Wyke Huizinga, Dirk H. J. Poot, Meike W. Vernooij, Gennady Roshchupkin, Esther Bron, Mohammad Arfan Ikram, Daniel Rueckert, Wiro J. Niessen, Stefan Klein:
A spatio-temporal reference model of the aging brain. NeuroImage 169: 11-22 (2018) - [j110]Carolyn D. Langen, Lotte G. M. Cremers, Marius de Groot, Tonya White, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij:
Disconnection due to white matter hyperintensities is associated with lower cognitive scores. NeuroImage 183: 745-756 (2018) - [c171]Yuanyuan Sun, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum:
Towards Robust CT-Ultrasound Registration Using Deep Learning Methods. MLCN/DLF/iMIMIC@MICCAI 2018: 43-51 - [c170]Bo Li, Marius de Groot, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Esther E. Bron:
Reproducible White Matter Tract Segmentation Using 3D U-Net on a Large-scale DTI Dataset. MLMI@MICCAI 2018: 205-213 - [c169]Martijn P. A. Starmans, Razvan L. Miclea, Sebastian R. van der Voort, Wiro J. Niessen, Maarten G. Thomeer, Stefan Klein:
Classification of malignant and benign liver tumors using a radiomics approach. Medical Imaging: Image Processing 2018: 105741D - [c168]Wei Sun, Dirk H. J. Poot, Xuan Yang, Wiro J. Niessen, Stefan Klein:
Averaged Stochastic Optimization for Medical Image Registration Based on Variance Reduction. WBIR 2018: 69-79 - [i10]Florian Dubost, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
3D Regression Neural Network for the Quantification of Enlarged Perivascular Spaces in Brain MRI. CoRR abs/1802.05914 (2018) - [i9]Lena Maier-Hein, Matthias Eisenmann, Annika Reinke, Sinan Onogur, Marko Stankovic, Patrick Scholz, Tal Arbel, Hrvoje Bogunovic, Andrew P. Bradley, Aaron Carass, Carolin Feldmann, Alejandro F. Frangi, Peter M. Full, Bram van Ginneken, Allan Hanbury, Katrin Honauer, Michal Kozubek, Bennett A. Landman, Keno März, Oskar Maier, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Peter F. Neher, Wiro J. Niessen, Nasir M. Rajpoot, Gregory C. Sharp, Korsuk Sirinukunwattana, Stefanie Speidel, Christian Stock, Danail Stoyanov, Abdel Aziz Taha, Fons van der Sommen, Ching-Wei Wang, Marc-André Weber, Guoyan Zheng, Pierre Jannin, Annette Kopp-Schneider:
Is the winner really the best? A critical analysis of common research practice in biomedical image analysis competitions. CoRR abs/1806.02051 (2018) - [i8]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Hydranet: Data Augmentation for Regression Neural Networks. CoRR abs/1807.04798 (2018) - [i7]Vikram Venkatraghavan, Esther E. Bron, Wiro J. Niessen, Stefan Klein, Alzheimer's Disease Neuroimaging Initiative:
Disease Progression Timeline Estimation for Alzheimer's Disease using Discriminative Event Based Modeling. CoRR abs/1808.03604 (2018) - [i6]Gerard Snaauw, Dong Gong, Gabriel Maicas, Anton van den Hengel, Wiro J. Niessen, Johan Verjans, Gustavo Carneiro:
End-to-End Diagnosis and Segmentation Learning from Cardiac Magnetic Resonance Imaging. CoRR abs/1810.10117 (2018) - 2017
- [j109]Guillaume Zahnd, Ayla Hoogendoorn, Nicolas Combaret, Antonios Karanasos, Emilie Péry, Laurent Sarry, Pascal Motreff, Wiro J. Niessen, Evelyn Regar, Gijs van Soest, Frank Gijsen, Theo van Walsum:
Contour segmentation of the intima, media, and adventitia layers in intracoronary OCT images: application to fully automatic detection of healthy wall regions. Int. J. Comput. Assist. Radiol. Surg. 12(11): 1923-1936 (2017) - [j108]Michel Dojat, David N. Kennedy, Wiro J. Niessen:
Editorial: MAPPING: MAnagement and Processing of Images for Population ImagiNG. Frontiers ICT 4: 18 (2017) - [j107]Anjana Ramkumar, Pieter Jan Stappers, Wiro J. Niessen, Sonja Adebahr, Tanja Schimek-Jasch, Ursula Nestle, Yu Song:
Using GOMS and NASA-TLX to Evaluate Human-Computer Interaction Process in Interactive Segmentation. Int. J. Hum. Comput. Interact. 33(2): 123-134 (2017) - [j106]Wei Sun, Dirk H. J. Poot, Ihor Smal, Xuan Yang, Wiro J. Niessen, Stefan Klein:
Stochastic optimization with randomized smoothing for image registration. Medical Image Anal. 35: 146-158 (2017) - [j105]Hua Ma, Ayla Hoogendoorn, Evelyn Regar, Wiro J. Niessen, Theo van Walsum:
Automatic online layer separation for vessel enhancement in X-ray angiograms for percutaneous coronary interventions. Medical Image Anal. 39: 145-161 (2017) - [j104]Wei Sun, Wiro J. Niessen, Stefan Klein:
Randomly Perturbed B-Splines for Nonrigid Image Registration. IEEE Trans. Pattern Anal. Mach. Intell. 39(7): 1401-1413 (2017) - [j103]Pierre Ambrosini, Ihor Smal, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
A Hidden Markov Model for 3D Catheter Tip Tracking With 2D X-ray Catheterization Sequence and 3D Rotational Angiography. IEEE Trans. Medical Imaging 36(3): 757-768 (2017) - [c167]Wiro J. Niessen:
Invited Talk: Big Data in Medical Image Computing. Bildverarbeitung für die Medizin 2017: 1 - [c166]Vikram Venkatraghavan, Esther E. Bron, Wiro J. Niessen, Stefan Klein:
A Discriminative Event Based Model for Alzheimer's Disease Progression Modeling. IPMI 2017: 121-133 - [c165]Carolyn D. Langen, Gennady V. Roshchupkin, Hieab H. Adams, Marius de Groot, Frans Vos, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen:
Heritability of connectivity and disconnectivity of the brain in a population-based study. ISBI 2017: 349-353 - [c164]Carolyn D. Langen, Meike W. Vernooij, Lotte G. M. Cremers, Wyke Huizinga, Marius de Groot, Mohammad Arfan Ikram, Tonya White, Wiro J. Niessen:
The structural disconnectome: A pathology-sensitive extension of the structural connectome. ISBI 2017: 366-370 - [c163]Sebastian R. van der Voort, Renske Gahrmann, Martin J. van den Bent, Arnaud J. P. E. Vincent, Wiro J. Niessen, Marion Smits, Stefan Klein:
Radiogenomic classification of the 1p/19q status in presumed low-grade gliomas. ISBI 2017: 638-641 - [c162]Georgius A. M. Arkesteijn, Dirk H. J. Poot, M. Niestijl, Meike W. Vernooij, Wiro J. Niessen, Lucas J. van Vliet, Frans M. Vos:
Longitudinal analysis of diffusion-weighted MRI with a ball-and-sticks model. ISBI 2017: 783-786 - [c161]Manon L. Tolhuisen, J. Enthoven, E. M. M. Santos, Wiro J. Niessen, L. F. M. Beenen, Diederik W. J. Dippel, Aad van der Lugt, Wim H. van Zwam, Yvo B. W. E. M. Roos, Robert J. van Oostenbrugge, Charles B. L. M. Majoie, Henk A. Marquering:
The Effect of Non-contrast CT Slice Thickness on Thrombus Density and Perviousness Assessment. CMMI/RAMBO/SWITCH@MICCAI 2017: 168-175 - [c160]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network. MICCAI (3) 2017: 214-221 - [c159]Pierre Ambrosini, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
Fully Automatic and Real-Time Catheter Segmentation in X-Ray Fluoroscopy. MICCAI (2) 2017: 577-585 - [c158]Mathias Polfliet, Stefan Klein, Wiro J. Niessen, Jef Vandemeulebroucke:
Laplacian eigenmaps for multimodal groupwise image registration. Medical Imaging: Image Processing 2017: 101331N - [c157]Arna van Engelen, Marleen de Bruijne, Torben Schneider, Anouk C. van Dijk, M. Eline Kooi, Jeroen Hendrikse, Aart J. Nederveen, Wiro J. Niessen, René M. Botnar:
Evaluating Classifiers for Atherosclerotic Plaque Component Segmentation in MRI. MIUA 2017: 156-168 - [e3]M. Jorge Cardoso, Tal Arbel, Fei Gao, Bernhard Kainz, Theo van Walsum, Kuangyu Shi, Kanwal K. Bhatia, Roman Peter, Tom Vercauteren, Mauricio Reyes, Adrian V. Dalca, Roland Wiest, Wiro J. Niessen, Bart J. Emmer:
Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment - Fifth International Workshop, CMMI 2017, Second International Workshop, RAMBO 2017, and First International Workshop, SWITCH 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 14, 2017, Proceedings. Lecture Notes in Computer Science 10555, Springer 2017, ISBN 978-3-319-67563-3 [contents] - [i5]Vikram Venkatraghavan, Esther Bron, Wiro J. Niessen, Stefan Klein:
A Discriminative Event Based Model for Alzheimer's Disease Progression Modeling. CoRR abs/1702.06408 (2017) - [i4]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network. CoRR abs/1705.07999 (2017) - [i3]Pierre Ambrosini, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
Fully Automatic and Real-Time Catheter Segmentation in X-Ray Fluoroscopy. CoRR abs/1707.05137 (2017) - 2016
- [j102]Guillaume Zahnd, Jelle Schrauwen, Antonios Karanasos, Evelyn Regar, Wiro J. Niessen, Theo van Walsum, Frank Gijsen:
Fusion of fibrous cap thickness and wall shear stress to assess plaque vulnerability in coronary arteries: a pilot study. Int. J. Comput. Assist. Radiol. Surg. 11(10): 1779-1790 (2016) - [j101]Hakim C. Achterberg, Marcel Koek, Wiro J. Niessen:
Fastr: A Workflow Engine for Advanced Data Flows in Medical Image Analysis. Frontiers ICT 3: 15 (2016) - [j100]Anjana Ramkumar, Jose Dolz, Hortense A. Kirisli, Sonja Adebahr, Tanja Schimek-Jasch, Ursula Nestle, Laurent Massoptier, Edit Varga, Pieter Jan Stappers, Wiro J. Niessen, Yu Song:
User Interaction in Semi-Automatic Segmentation of Organs at Risk: a Case Study in Radiotherapy. J. Digit. Imaging 29(2): 264-277 (2016) - [j99]Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, R. Klaassen, Bram F. Coolen, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Mathias Polfliet, Jef Vandemeulebroucke, Alexander Leemans, Wiro J. Niessen, Stefan Klein:
PCA-based groupwise image registration for quantitative MRI. Medical Image Anal. 29: 65-78 (2016) - [j98]Wiro J. Niessen:
MR brain image analysis in dementia: From quantitative imaging biomarkers to ageing brain models and imaging genetics. Medical Image Anal. 33: 107-113 (2016) - [j97]Markus A. de Jong, Andreas Wollstein, Clifford Ruff, David J. Dunaway, Pirro Hysi, Tim Spector, Fan Liu, Wiro J. Niessen, Maarten J. Koudstaal, Manfred Kayser, Eppo B. Wolvius, Stefan Böhringer:
An Automatic 3D Facial Landmarking Algorithm Using 2D Gabor Wavelets. IEEE Trans. Image Process. 25(2): 580-588 (2016) - [j96]Jyotirmoy Banerjee, Camiel Klink, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
4D Ultrasound Tracking of Liver and its Verification for TIPS Guidance. IEEE Trans. Medical Imaging 35(1): 52-62 (2016) - [j95]Andrés M. Arias Lorza, Jens Petersen, Arna van Engelen, Mariana Selwaness, Aad van der Lugt, Wiro J. Niessen, Marleen de Bruijne:
Carotid Artery Wall Segmentation in Multispectral MRI by Coupled Optimal Surface Graph Cuts. IEEE Trans. Medical Imaging 35(3): 901-911 (2016) - [c156]Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Dirk H. J. Poot, Matthijs van Kranenburg, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein:
Total Correlation-Based Groupwise Image Registration for Quantitative MRI. CVPR Workshops 2016: 626-633 - [c155]Wyke Huizinga, Dirk H. J. Poot, Gennady V. Roshchupkin, Esther E. Bron, Mohammad Arfan Ikram, Meike W. Vernooij, Daniel Rueckert, Wiro J. Niessen, Stefan Klein:
Modeling the brain morphology distribution in the general aging population. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2016: 97880I - 2015
- [j94]Hui Tang, Mariana Selwaness, Reinhard Hameeteman, Anouk C. van Dijk, Aad van der Lugt, Jacqueline C. M. Witteman, Wiro J. Niessen, Lucas J. van Vliet, Theo van Walsum:
Semi-automatic MRI segmentation and volume quantification of intra-plaque hemorrhage. Int. J. Comput. Assist. Radiol. Surg. 10(1): 67-74 (2015) - [j93]Pierre Ambrosini, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
Continuous roadmapping in liver TACE procedures using 2D-3D catheter-based registration. Int. J. Comput. Assist. Radiol. Surg. 10(9): 1357-1370 (2015) - [j92]Guillaume Zahnd, Antonios Karanasos, Gijs van Soest, Evelyn Regar, Wiro J. Niessen, Frank Gijsen, Theo van Walsum:
Quantification of fibrous cap thickness in intracoronary optical coherence tomography with a contour segmentation method based on dynamic programming. Int. J. Comput. Assist. Radiol. Surg. 10(9): 1383-1394 (2015) - [j91]Stefan Klein, Erwin Vast, Johan van Soest, Andre Dekker, Marcel Koek, Wiro J. Niessen:
XNAT imaging platform for BioMedBridges and CTMM TraIT. J. Clin. Bioinform. 5(S-1): S18 (2015) - [j90]Jyotirmoy Banerjee, Camiel Klink, Edward D. Peters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
Fast and robust 3D ultrasound registration - Block and game theoretic matching. Medical Image Anal. 20(1): 173-183 (2015) - [j89]Kai Yan Eugene Leung, Fedde van der Lijn, Henri A. Vrooman, Miriam C. J. M. Sturkenboom, Wiro J. Niessen:
IT Infrastructure to Support the Secondary Use of Routinely Acquired Clinical Imaging Data for Research. Neuroinformatics 13(1): 65-81 (2015) - [j88]Esther E. Bron, Marion Smits, Wiro J. Niessen, Stefan Klein:
Feature Selection Based on the SVM Weight Vector for Classification of Dementia. IEEE J. Biomed. Health Informatics 19(5): 1617-1626 (2015) - [j87]Diego D. B. Carvalho, Zeynettin Akkus, Stijn C. H. van den Oord, Arend F. L. Schinkel, Antonius F. W. van der Steen, Wiro J. Niessen, Johan G. Bosch, Stefan Klein:
Lumen Segmentation and Motion Estimation in B-Mode and Contrast-Enhanced Ultrasound Images of the Carotid Artery in Patients With Atherosclerotic Plaque. IEEE Trans. Medical Imaging 34(4): 983-993 (2015) - [j86]Arna van Engelen, Anouk C. van Dijk, Martine T. B. Truijman, Ronald van't Klooster, Annegreet van Opbroek, Aad van der Lugt, Wiro J. Niessen, M. Eline Kooi, Marleen de Bruijne:
Multi-Center MRI Carotid Plaque Component Segmentation Using Feature Normalization and Transfer Learning. IEEE Trans. Medical Imaging 34(6): 1294-1305 (2015) - [c154]Georgius A. M. Arkesteijn, Dirk H. J. Poot, Meike de Groot, Meike W. Vernooij, Wiro J. Niessen, Lucas J. van Vliet, Frans M. Vos:
CSF contamination-invariant statistics in diffusion-weighted MRI. ISBI 2015: 454-457 - [c153]Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein:
Groupwise image registration of multimodal head-and-neck images. ISBI 2015: 730-733 - [c152]Pierre Ambrosini, Ihor Smal, Daniel Ruijters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
3D Catheter Tip Tracking in 2D X-Ray Image Sequences Using a Hidden Markov Model and 3D Rotational Angiography. AE-CAI 2015: 38-49 - [c151]Hua Ma, Gerardo Dibildox, Jyotirmoy Banerjee, Wiro J. Niessen, Carl J. Schultz, Evelyn Regar, Theo van Walsum:
Layer Separation for Vessel Enhancement in Interventional X-ray Angiograms Using Morphological Filtering and Robust PCA. AE-CAI 2015: 104-113 - 2014
- [j85]Nora Baka, Coert Metz, Carl J. Schultz, Robert Jan van Geuns, Wiro J. Niessen, Theo van Walsum:
Oriented Gaussian Mixture Models for Nonrigid 2D/3D Coronary Artery Registration. IEEE Trans. Medical Imaging 33(5): 1023-1034 (2014) - [c150]Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini:
An adaptive distributed resampling algorithm with non-proportional allocation. ICASSP 2014: 1635-1639 - [c149]Guillaume Zahnd, Antonios Karanasos, Gijs van Soest, Evelyn Regar, Wiro J. Niessen, Frank Gijsen, Theo van Walsum:
Semi-automated Quantification of Fibrous Cap Thickness in Intracoronary Optical Coherence Tomography. IPCAI 2014: 78-89 - [c148]Pierre Ambrosini, Danny Ruijters, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum:
2D/3D Catheter-Based Registration for Image Guidance in TACE of Liver Tumors. IPCAI 2014: 246-255 - [c147]Miroslav Radojevic, Ihor Smal, Wiro J. Niessen, Erik Meijering:
Fuzzy logic based detection of neuron bifurcations in microscopy images. ISBI 2014: 1307-1310 - [c146]Wei Sun, Wiro J. Niessen, Stefan Klein:
Free-Form Deformation Using Lower-Order B-spline for Nonrigid Image Registration. MICCAI (1) 2014: 194-201 - [c145]Esther Bron, Marion Smits, John van Swieten, Wiro J. Niessen, Stefan Klein:
Feature Selection Based on SVM Significance Maps for Classification of Dementia. MLMI 2014: 272-279 - [c144]Diego D. B. Carvalho, Zeynettin Akkus, Johan G. Bosch, Stijn C. H. van den Oord, Wiro J. Niessen, Stefan Klein:
Nonrigid motion compensation in B-mode and contrast enhanced ultrasound image sequences of the carotid artery. Medical Imaging: Image Processing 2014: 90340N - [c143]Jean-Marie Guyader, Livia Bernardin, Naomi H. M. Douglas, Dirk H. J. Poot, Wiro J. Niessen, Stefan Klein:
Influence of image registration on ADC images computed from free-breathing diffusion MRIs of the abdomen. Medical Imaging: Image Processing 2014: 90340O - [c142]Wei Sun, Wiro J. Niessen, Stefan Klein:
Wavelet based free-form deformations for nonrigid registration. Medical Imaging: Image Processing 2014: 90343N - [c141]Wei Sun, Wiro J. Niessen, Stefan Klein:
Randomly Perturbed Free-Form Deformation for Nonrigid Image Registration. WBIR 2014: 62-71 - [c140]Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, Henk Smit, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Heleen M. M. van Beusekom, Bram F. Coolen, Alexander Leemans, Wiro J. Niessen, Stefan Klein:
Non-rigid Groupwise Image Registration for Motion Compensation in Quantitative MRI. WBIR 2014: 184-193 - [c139]Jyotirmoy Banerjee, Camiel Klink, Edward D. Peters, Wiro J. Niessen, Adriaan Moelker, Theo van Walsum:
4D Liver Ultrasound Registration. WBIR 2014: 194-202 - 2013
- [j84]Wiro J. Niessen, Shuo Li, Song Wang:
Special issue on Shape Modeling in Medical Image Analysis. Comput. Vis. Image Underst. 117(9): 965 (2013) - [j83]K. Hameeteman, Sietske Rozie, Coert Metz, Rashindra Manniesing, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen, Stefan Klein:
Automatic carotid artery distensibility measurements from CTA using nonrigid registration. Medical Image Anal. 17(5): 515-524 (2013) - [j82]Nora Baka, Coert Metz, Carl J. Schultz, Lisan Neefjes, Robert Jan van Geuns, Boudewijn P. F. Lelieveldt, Wiro J. Niessen, Theo van Walsum, Marleen de Bruijne:
Statistical coronary motion models for 2D + t/3D registration of X-ray coronary angiography and CTA. Medical Image Anal. 17(6): 698-709 (2013) - [j81]Hortense A. Kirisli, Michiel Schaap, Coert Metz, A. S. Dharampal, W. B. Meijboom, S. L. Papadopoulou, A. Dedic, K. Nieman, Michiel A. de Graaf, M. F. L. Meijs, M. J. Cramer, Alexander Broersen, Suheyla Cetin, Abouzar Eslami, Leonardo Floréz-Valencia, Kuo-Lung Lor, Bogdan J. Matuszewski, Imen Melki, Brian Mohr, Ilkay Öksüz, Rahil Khurram Shahzad, Chunliang Wang, Pieter H. Kitslaar, Gözde B. Ünal, Amin Katouzian, Maciej Orkisz, Chung-Ming Chen, Frédéric Precioso, Laurent Najman, S. Masood, Devrim Ünay, Lucas J. van Vliet, Rodrigo Moreno, Roman Goldenberg, Erald Vuçini, Gabriel P. Krestin, Wiro J. Niessen, Theo van Walsum:
Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography. Medical Image Anal. 17(8): 859-876 (2013) - [j80]Marius de Groot, Meike W. Vernooij, Stefan Klein, Mohammad Arfan Ikram, Frans M. Vos, Stephen M. Smith, Wiro J. Niessen, Jesper L. R. Andersson:
Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration. NeuroImage 76: 400-411 (2013) - [j79]Wei Sun, Wiro J. Niessen, Marijn van Stralen, Stefan Klein:
Simultaneous Multiresolution Strategies for Nonrigid Image Registration. IEEE Trans. Image Process. 22(12): 4905-4917 (2013) - [j78]Coert Metz, Michiel Schaap, Stefan Klein, Nora Baka, Lisan Neefjes, Carl J. Schultz, Wiro J. Niessen, Theo van Walsum:
Registration of 3D+t Coronary CTA and Monoplane 2D+t X-Ray Angiography. IEEE Trans. Medical Imaging 32(5): 919-931 (2013) - [c138]Esben Plenge, Dirk H. J. Poot, Wiro J. Niessen, Erik Meijering:
Super-Resolution Reconstruction Using Cross-Scale Self-similarity in Multi-slice MRI. MICCAI (3) 2013: 123-130 - [c137]Wyke Huizinga, Coert T. Metz, Dirk H. J. Poot, Meike de Groot, Wiro J. Niessen, Alexander Leemans, Stefan Klein:
Groupwise Registration for Correcting Subject Motion and Eddy Current Distortions in Diffusion MRI Using a PCA Based Dissimilarity Metric. CDMRI/MMBC@MICCAI 2013: 163-174 - [c136]Andrés M. Arias Lorza, Diego D. B. Carvalho, Jens Petersen, Anouk C. van Dijk, Aad van der Lugt, Wiro J. Niessen, Stefan Klein, Marleen de Bruijne:
Carotid Artery Lumen Segmentation in 3D Free-Hand Ultrasound Images Using Surface Graph Cuts. MICCAI (2) 2013: 542-549 - [c135]Dirk H. J. Poot, Gyula Kotek, Wiro J. Niessen, Stefan Klein:
Bias correction of maximum likelihood estimation in quantitative MRI. Medical Imaging: Image Processing 2013: 86691F - [c134]Hakim C. Achterberg, Dirk H. J. Poot, Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Marleen de Bruijne:
Local appearance features for robust MRI brain structure segmentation across scanning protocols. Medical Imaging: Image Processing 2013: 866905 - [i2]Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini:
PPF - A Parallel Particle Filtering Library. CoRR abs/1310.5045 (2013) - [i1]Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini:
Piecewise Constant Sequential Importance Sampling for Fast Particle Filtering. CoRR abs/1310.5541 (2013) - 2012
- [j77]Diego D. B. Carvalho, Stefan Klein, Zeynettin Akkus, Gerrit L. ten Kate, Arend F. L. Schinkel, Johan G. Bosch, Aad van der Lugt, Wiro J. Niessen:
Estimating 3D lumen centerlines of carotid arteries in free-hand acquisition ultrasound. Int. J. Comput. Assist. Radiol. Surg. 7(2): 207-215 (2012) - [j76]Hortense A. Kirisli, Vikas Gupta, Sharon W. Kirschbaum, Alexia Rossi, Coert Metz, Michiel Schaap, Robert Jan van Geuns, Nico Mollet, Boudewijn P. F. Lelieveldt, Johan H. C. Reiber, Theo van Walsum, Wiro J. Niessen:
Comprehensive visualization of multimodal cardiac imaging data for assessment of coronary artery disease: first clinical results of the SMARTVis tool. Int. J. Comput. Assist. Radiol. Surg. 7(4): 557-571 (2012) - [j75]Alfonso A. Isola, Coert Metz, Michiel Schaap, Stefan Klein, Michael Grass, Wiro J. Niessen:
Cardiac motion-corrected iterative cone-beam CT reconstruction using a semi-automatic minimum cost path-based coronary centerline extraction. Comput. Medical Imaging Graph. 36(3): 215-226 (2012) - [j74]Ihor Smal, Noemí Carranza-Herrezuelo, Stefan Klein, Piotr Wielopolski, Adriaan Moelker, Tirza Springeling, Monique Bernsen, Wiro J. Niessen, Erik Meijering:
Reversible jump MCMC methods for fully automatic motion analysis in tagged MRI. Medical Image Anal. 16(1): 301-324 (2012) - [j73]Vikas Gupta, Hortense A. Kirisli, Emile A. Hendriks, Rob J. van der Geest, Martijn van de Giessen, Wiro J. Niessen, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt:
Cardiac MR perfusion image processing techniques: A survey. Medical Image Anal. 16(4): 767-785 (2012) - [j72]Hui Tang, Theo van Walsum, Robbert S. van Onkelen, Reinhard Hameeteman, Stefan Klein, Michiel Schaap, Fufa L. Tori, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet, Wiro J. Niessen:
Semiautomatic carotid lumen segmentation for quantification of lumen geometry in multispectral MRI. Medical Image Anal. 16(6): 1202-1215 (2012) - [j71]Fedde van der Lijn, Benjamin F. J. Verhaaren, Mohammad Arfan Ikram, Stefan Klein, Marleen de Bruijne, Henri A. Vrooman, Meike W. Vernooij, Alexander Hammers, Daniel Rueckert, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen:
Automated measurement of local white matter lesion volume. NeuroImage 59(4): 3901-3908 (2012) - [j70]Tom den Heijer, Fedde van der Lijn, Meike W. Vernooij, Marius de Groot, P. J. Koudstaal, Aad van der Lugt, Gabriel P. Krestin, Albert Hofman, Wiro J. Niessen, Monique M. B. Breteler:
Structural and diffusion MRI measures of the hippocampus and memory performance. NeuroImage 63(4): 1782-1789 (2012) - [j69]Fedde van der Lijn, Marleen de Bruijne, Stefan Klein, Tom den Heijer, Yoo Young Hoogendam, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen:
Automated Brain Structure Segmentation Based on Atlas Registration and Appearance Models. IEEE Trans. Medical Imaging 31(2): 276-286 (2012) - [j68]Coert Metz, Nora Baka, Hortense A. Kirisli, Michiel Schaap, Stefan Klein, Lisan Neefjes, Nico Mollet, Boudewijn P. F. Lelieveldt, Marleen de Bruijne, Wiro J. Niessen, Theo van Walsum:
Regression-Based Cardiac Motion Prediction From Single-Phase CTA. IEEE Trans. Medical Imaging 31(6): 1311-1325 (2012) - [j67]Nora Baka, Marleen de Bruijne, Theo van Walsum, Bart L. Kaptein, J. E. Giphart, Michiel Schaap, Wiro J. Niessen, Boudewijn P. F. Lelieveldt:
Statistical Shape Model-Based Femur Kinematics From Biplane Fluoroscopy. IEEE Trans. Medical Imaging 31(8): 1573-1583 (2012) - [c133]Jyotirmoy Banerjee, Adriaan Moelker, Wiro J. Niessen, Theo van Walsum:
3D LBP-Based Rotationally Invariant Region Description. ACCV Workshops (1) 2012: 26-37 - [c132]Babak Ghafaryasl, Fedde van der Lijn, Marielle Poels, Henri A. Vrooman, Mohammad Arfan Ikram, Wiro J. Niessen, Aad van der Lugt, Meike W. Vernooij, Marleen de Bruijne:
A computer aided detection system for cerebral microbleeds in brain MRI. ISBI 2012: 138-141 - [c131]Arna van Engelen, Wiro J. Niessen, Stefan Klein, Harald C. Groen, Hence J. M. Verhagen, Jolanda Wentzel, Aad van der Lugt, Marleen de Bruijne:
Supervised in-vivo plaque characterization incorporating class label uncertainty. ISBI 2012: 246-249 - [c130]Rahil Khurram Shahzad, Michiel Schaap, Frederico Bastos Goncalves, Coert Metz, Hui Tang, Theo van Walsum, Adriaan Moelker, Lucas J. van Vliet, Wiro J. Niessen:
Automatic detection of calcified lesions in the descending aorta using contrast enhanced CT scans. ISBI 2012: 250-253 - [c129]Hui Tang, Theo van Walsum, Reinhard Hameeteman, Michiel Schaap, Aad van der Lugt, Lucas J. van Vliet, Wiro J. Niessen:
Lumen segmentation of atherosclerotic carotid arteries in CTA. ISBI 2012: 274-277 - [c128]Wiro J. Niessen, Henri A. Vrooman, Renske de Boer, Fedde van der Lijn, Hakim C. Achterberg, Marcel Koek, Stefan Klein, Aad van der Lugt, Marleen de Bruijne, Mohammad Arfan Ikram, Meike W. Vernooij:
Quantitative imaging biomarkers in neurologic disease: Population study perspective. ISBI 2012: 911 - [c127]Karin Bol, Joost C. Haeck, Lejla Alic, Wiro J. Niessen, Marion de Jong, Monique Bernsen, Jifke F. Veenland:
Quantification of DCE-MRI: A validation of three techniques with 3D-histology. ISBI 2012: 1044-1047 - [c126]Valerio Fortunati, René F. Verhaart, Fedde van der Lijn, Wiro J. Niessen, Jifke F. Veenland, Maarten M. Paulides, Theo van Walsum:
Hyperthermia critical tissues automatic segmentation of head and neck CT images using atlas registration and graph cuts. ISBI 2012: 1683-1686 - [c125]Artem Khmelinskii, Esben Plenge, Peter Kok, Oleh Dzyubachyk, Dirk H. J. Poot, E. Suidgeest, Charl P. Botha, Wiro J. Niessen, Louise van der Weerd, Erik Meijering, Boudewijn P. F. Lelieveldt:
Super-resolution reconstruction of whole-body MRI mouse data: An interactive approach. ISBI 2012: 1723-1726 - [c124]Andres Arias, Jens Petersen, Arna van Engelen, Hui Tang, Mariana Selwaness, Jacqueline C. M. Witteman, Aad van der Lugt, Wiro J. Niessen, Marleen de Bruijne:
Carotid Artery Wall Segmentation by Coupled Surface Graph Cuts. MCV 2012: 38-47 - [c123]Ha Manh Luu, Adriaan Moelker, Camiel Klink, Adriënne Mendrik, Wiro J. Niessen, Theo van Walsum:
Evaluation of Diffusion Filters for 3D CTA Liver Vessel Enhancement. Abdominal Imaging 2012: 168-177 - [c122]Vikas Gupta, Martijn van de Giessen, Hortense A. Kirisli, Sharon W. Kirschbaum, Wiro J. Niessen, Boudewijn P. F. Lelieveldt:
Robust Motion Correction in the Frequency Domain of Cardiac MR Stress Perfusion Sequences. MICCAI (1) 2012: 667-674 - [c121]Esben Plenge, Dirk H. J. Poot, Monique Bernsen, Gyula Kotek, Gavin Houston, Piotr Wielopolski, Louise van der Weerd, Wiro J. Niessen, Erik Meijering:
Super-resolution in MRI: better images faster? Medical Imaging: Image Processing 2012: 83143V - [c120]Azadeh Firouzian, Rashindra Manniesing, Coert T. Metz, Stefan Klein, Birgitta K. Velthuis, Gabriel J. E. Rinkel, Aad van der Lugt, Wiro J. Niessen:
Intracranial aneurysm growth quantification in CTA. Medical Imaging: Image Processing 2012: 831448 - [c119]Wei Sun, Wiro J. Niessen, Stefan Klein:
Hierarchical vs. Simultaneous Multiresolution Strategies for Nonrigid Image Registration. WBIR 2012: 60-69 - [c118]Diego D. B. Carvalho, Stefan Klein, Zeynettin Akkus, Gerrit L. ten Kate, Hui Tang, Mariana Selwaness, Arend F. L. Schinkel, Johan G. Bosch, Aad van der Lugt, Wiro J. Niessen:
Registration of Free-Hand Ultrasound and MRI of Carotid Arteries through Combination of Point-Based and Intensity-Based Algorithms. WBIR 2012: 131-140 - 2011
- [j66]Coert Metz, Stefan Klein, Michiel Schaap, Theo van Walsum, Wiro J. Niessen:
Nonrigid registration of dynamic medical imaging data using nD + t B-splines and a groupwise optimization approach. Medical Image Anal. 15(2): 238-249 (2011) - [j65]K. Hameeteman, Maria A. Zuluaga, Moti Freiman, Leo Joskowicz, Olivier Cuisenaire, Leonardo Floréz-Valencia, Mehmet Akif Gülsün, Karl Krissian, Julien Mille, Wilbur C. K. Wong, Maciej Orkisz, Hüseyin Tek, Marcela Hernández Hoyos, Fethallah Benmansour, Albert C. S. Chung, Sietske Rozie, M. van Gils, L. van den Borne, Jacob Sosna, Phillip M. Berman, N. Cohen, Philippe Douek, I. Sánchez, M. Aissat, Michiel Schaap, Coert Metz, Gabriel P. Krestin, Aad van der Lugt, Wiro J. Niessen, Theo van Walsum:
Evaluation framework for carotid bifurcation lumen segmentation and stenosis grading. Medical Image Anal. 15(4): 477-488 (2011) - [j64]Nora Baka, Bart L. Kaptein, Marleen de Bruijne, Theo van Walsum, J. E. Giphart, Wiro J. Niessen, Boudewijn P. F. Lelieveldt:
2D-3D shape reconstruction of the distal femur from stereo X-ray imaging using statistical shape models. Medical Image Anal. 15(6): 840-850 (2011) - [j63]Renske de Boer, Michiel Schaap, Fedde van der Lijn, Henri A. Vrooman, Marius de Groot, Aad van der Lugt, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Wiro J. Niessen:
Statistical analysis of minimum cost path based structural brain connectivity. NeuroImage 55(2): 557-565 (2011) - [j62]Michiel Schaap, Theo van Walsum, Lisan Neefjes, Coert Metz, Ermanno Capuano, Marleen de Bruijne, Wiro J. Niessen:
Robust Shape Regression for Supervised Vessel Segmentation and its Application to Coronary Segmentation in CTA. IEEE Trans. Medical Imaging 30(11): 1974-1986 (2011) - [c117]Ihor Smal, Noemí Carranza-Herrezuelo, Stefan Klein, Wiro J. Niessen, Erik Meijering:
Quantitative comparison of tracking methods for motion analysis in tagged MRI. ISBI 2011: 345-348 - [c116]Noemí Carranza-Herrezuelo, Ihor Smal, Oleh Dzyubachyk, Wiro J. Niessen, Erik Meijering:
Automated lineage tree reconstruction from Caenorhabditis elegans image data using particle filtering based cell tracking. ISBI 2011: 1921-1924 - [c115]Arna van Engelen, Marleen de Bruijne, Stefan Klein, Hence J. M. Verhagen, Harald C. Groen, Jolanda Wentzel, Aad van der Lugt, Wiro J. Niessen:
Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology. Medical Imaging: Computer-Aided Diagnosis 2011: 796329 - [c114]Coert Metz, Michiel Schaap, Stefan Klein, Peter R. Rijnbeek, Lisan Neefjes, Nico Mollet, Carl J. Schultz, Patrick W. Serruys, Wiro J. Niessen, Theo van Walsum:
Alignment of 4D Coronary CTA with Monoplane X-ray Angiography. AE-CAI 2011: 106-116 - [c113]Dirk H. J. Poot, Marleen de Bruijne, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen:
Improved Tissue Segmentation by Including an MR Acquisition Model. MBIA 2011: 152-159 - [c112]Marcel Koek, Frederico Bastos Goncalves, Don Poldermans, Wiro J. Niessen, Rashindra Manniesing:
Semi-automated Subcutaneous and Visceral Adipose Tissue Quantification in Computed Tomography. Abdominal Imaging 2011: 215-222 - [c111]Nora Baka, Coert Metz, Michiel Schaap, Boudewijn P. F. Lelieveldt, Wiro J. Niessen, Marleen de Bruijne:
Comparison of Shape Regression Methods under Landmark Position Uncertainty. MICCAI (2) 2011: 434-441 - [c110]Ihor Smal, Noemí Carranza-Herrezuelo, Stefan Klein, Wiro J. Niessen, Erik Meijering:
Trans-Dimensional MCMC Methods for Fully Automatic Motion Analysis in Tagged MRI. MICCAI (1) 2011: 573-580 - [c109]Hortense A. Kirisli, V. Gupta, Sharon W. Kirschbaum, Lisan Neefjes, Robert Jan van Geuns, Nico Mollet, Boudewijn P. F. Lelieveldt, Johan H. C. Reiber, Theo van Walsum, Wiro J. Niessen:
A patient-specific visualization tool for comprehensive analysis of coronary CTA and perfusion MRI data. Medical Imaging: Image-Guided Procedures 2011: 796410 - [c108]Hui Tang, Theo van Walsum, Robbert S. van Onkelen, Stefan Klein, Reinhard Hameeteman, Michiel Schaap, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet, Wiro J. Niessen:
Multispectral MRI centerline tracking in carotid arteries. Medical Imaging: Image Processing 2011: 79621N - [c107]Danijela Vukadinovic, Theo van Walsum, Rashindra Manniesing, Sietske Rozie, Aad van der Lugt, Wiro J. Niessen:
Region based level set segmentation of the outer wall of the carotid bifurcation in CTA. Medical Imaging: Image Processing 2011: 79623P - 2010
- [j61]Oleh Dzyubachyk, Jeroen Essers, Wiggert A. van Cappellen, Céline Baldeyron, Akiko Inagaki, Wiro J. Niessen, Erik Meijering:
Automated analysis of time-lapse fluorescence microscopy images: from live cell images to intracellular foci. Bioinform. 26(19): 2424-2430 (2010) - [j60]Alfonso A. Isola, A. Ziegler, Dirk Schäfer, Thomas Köhler, Wiro J. Niessen, Michael Grass:
Motion compensated iterative reconstruction of a region of interest in cardiac cone-beam CT. Comput. Medical Imaging Graph. 34(2): 149-159 (2010) - [j59]Rashindra Manniesing, Michiel Schaap, Sietske Rozie, Reinhard Hameeteman, Danijela Vukadinovic, Aad van der Lugt, Wiro J. Niessen:
Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population. Medical Image Anal. 14(6): 759-769 (2010) - [j58]Renske de Boer, Henri A. Vrooman, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Aad van der Lugt, Wiro J. Niessen:
Accuracy and reproducibility study of automatic MRI brain tissue segmentation methods. NeuroImage 51(3): 1047-1056 (2010) - [j57]Ihor Smal, Ilya Grigoriev, Anna Akhmanova, Wiro J. Niessen, Erik Meijering:
Microtubule Dynamics Analysis Using Kymographs and Variable-Rate Particle Filters. IEEE Trans. Image Process. 19(7): 1861-1876 (2010) - [j56]Danijela Vukadinovic, Theo van Walsum, Rashindra Manniesing, Sietske Rozie, Reinhard Hameeteman, Thomas de Weert, Aad van der Lugt, Wiro J. Niessen:
Segmentation of the Outer Vessel Wall of the Common Carotid Artery in CTA. IEEE Trans. Medical Imaging 29(1): 65-76 (2010) - [j55]Ihor Smal, Marco Loog, Wiro J. Niessen, Erik Meijering:
Quantitative Comparison of Spot Detection Methods in Fluorescence Microscopy. IEEE Trans. Medical Imaging 29(2): 282-301 (2010) - [j54]Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers, Wiro J. Niessen, Erik Meijering:
Advanced Level-Set-Based Cell Tracking in Time-Lapse Fluorescence Microscopy. IEEE Trans. Medical Imaging 29(3): 852-867 (2010) - [j53]Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers, Wiro J. Niessen, Erik Meijering:
Correction to "Advanced Level-Set-Based Cell Tracking in Time-Lapse Fluorescence Microscopy". IEEE Trans. Medical Imaging 29(6): 1331 (2010) - [c106]Rahil Khurram Shahzad, Michiel Schaap, Theo van Walsum, Stefan Klein, Annick C. Weustink, Lucas J. van Vliet, Wiro J. Niessen:
A patient-specific coronary density estimate. ISBI 2010: 9-12 - [c105]Reinhard Hameeteman, Sietske Rozie, Coert Metz, Stefan Klein, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen:
Automated carotid artery distensibility measurements from CTA using nonrigid registration. ISBI 2010: 13-16 - [c104]Stefan Klein, Marco Loog, Fedde van der Lijn, Tom den Heijer, Alexander Hammers, Marleen de Bruijne, Aad van der Lugt, Robert P. W. Duin, Monique M. B. Breteler, Wiro J. Niessen:
Early diagnosis of dementia based on intersubject whole-brain dissimilarities. ISBI 2010: 249-252 - [c103]Ihor Smal, Wiro J. Niessen, Erik Meijering:
Particle filtering methods for motion analysis in tagged MRI. ISBI 2010: 488-491 - [c102]Dong Ping Zhang, Laurent Risser, Coert Metz, Lisan Neefjes, Nico Mollet, Wiro J. Niessen, Daniel Rueckert:
Coronary artery motion modeling from 3D cardiac CT sequences using template matching and graph search. ISBI 2010: 1053-1056 - [c101]Nora Baka, Marleen de Bruijne, Johan H. C. Reiber, Wiro J. Niessen, Boudewijn P. F. Lelieveldt:
Confidence of model based shape reconstruction from sparse data. ISBI 2010: 1077-1080 - [c100]Dong Ping Zhang, Laurent Risser, François-Xavier Vialard, Philip J. Edwards, Coert Metz, Lisan Neefjes, Nico Mollet, Wiro J. Niessen, Daniel Rueckert:
Coronary Motion Estimation from CTA Using Probability Atlas and Diffeomorphic Registration. MIAR 2010: 78-87 - [c99]Hakim C. Achterberg, Fedde van der Lijn, Tom den Heijer, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen, Marleen de Bruijne:
Prediction of Dementia by Hippocampal Shape Analysis. MLMI 2010: 42-49 - [c98]Nora Baka, Wiro J. Niessen, Bart L. Kaptein, Theo van Walsum, Luca Ferrarini, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt:
Correspondence free 3D statistical shape model fitting to sparse x-ray projections. Medical Imaging: Image Processing 2010: 76230D - [c97]Azadeh Firouzian, Rashindra Manniesing, Zwenneke H. Flach, Roelof Risselada, Fop van Kooten, Miriam C. J. M. Sturkenboom, Aad van der Lugt, Wiro J. Niessen:
Intracranial aneurysm segmentation in 3D CT angiography: method and quantitative validation. Medical Imaging: Image Processing 2010: 76233M - [c96]Hortense A. Kirisli, Michiel Schaap, Stefan Klein, Lisan Neefjes, Annick C. Weustink, Theo van Walsum, Wiro J. Niessen:
Fully automatic cardiac segmentation from 3D CTA data: a multi-atlas based approach. Medical Imaging: Image Processing 2010: 762305 - [c95]Dong Ping Zhang, Laurent Risser, Ola Friman, Coert Metz, Lisan Neefjes, Nico Mollet, Wiro J. Niessen, Daniel Rueckert:
Nonrigid Registration and Template Matching for Coronary Motion Modeling from 4D CTA. WBIR 2010: 210-221
2000 – 2009
- 2009
- [j52]Mads Nielsen, Wiro J. Niessen, Carl-Fredrik Westin:
Editorial. Int. J. Comput. Vis. 85(3): 209-210 (2009) - [j51]Michiel Schaap, Coert Metz, Theo van Walsum, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Christian Bauer, Hrvoje Bogunovic, Carlos Castro-Gonzalez, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H. Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A. Luengo-Oroz, Maciej Orkisz, Örjan Smedby, Martin Styner, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K. Warfield, Sebastian Zambal, Yong Zhang, Gabriel P. Krestin, Wiro J. Niessen:
Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. Medical Image Anal. 13(5): 701-714 (2009) - [j50]Renske de Boer, Henri A. Vrooman, Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen:
White matter lesion extension to automatic brain tissue segmentation on MRI. NeuroImage 45(4): 1151-1161 (2009) - [j49]Empar Rollano-Hijarrubia, Rashindra Manniesing, Wiro J. Niessen:
Selective Deblurring for Improved Calcification Visualization and Quantification in Carotid CT Angiography: Validation Using Micro-CT. IEEE Trans. Medical Imaging 28(3): 446-453 (2009) - [c94]Michiel Schaap, Lisan Neefjes, Coert Metz, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Jolanda Wentzel, Theo van Walsum, Wiro J. Niessen:
Coronary Lumen Segmentation Using Graph Cuts and Robust Kernel Regression. IPMI 2009: 528-539 - [c93]Fedde van der Lijn, Marleen de Bruijne, Yoo Young Hoogendam, Stefan Klein, Reinhard Hameeteman, Monique M. B. Breteler, Wiro J. Niessen:
Cerebellum Segmentation in MRI Using Atlas Registration and Local Multi-Scale Image Descriptors. ISBI 2009: 221-224 - [c92]Nico Karssemeijer, Henkjan J. Huisman, David J. Hawkes, John H. Hipwell, Tobias Böhler, Jan M. Lesniak, Christine Tanner, Gábor Székely, Wiro J. Niessen, Horst K. Hahn:
Integrating Biological Knowledge, Novel Imaging Modalities, and Modeling in Breast Cancer Diagnosis. ISBI 2009: 386-389 - [c91]Danijela Vukadinovic, Theo van Walsum, Sietske Rozie, Thomas de Weert, Rashindra Manniesing, Aad van der Lugt, Wiro J. Niessen:
Carotid Artery Segmentation and Plaque Quantification in CTA. ISBI 2009: 835-838 - [c90]Coert Metz, Michiel Schaap, Stefan Klein, Annick C. Weustink, Nico Mollet, Carl J. Schultz, Robert Jan van Geuns, Patrick W. Serruys, Theo van Walsum, Wiro J. Niessen:
GPU Accelerated Alignment of 3-D CTA with 2-D X-Ray Data for Improved Guidance in Coronary Interventions. ISBI 2009: 959-962 - [c89]Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers, Wiro J. Niessen, Erik Meijering:
Energy Minimization Methods for Cell Motion Correction and Intracellular Analysis in Live-Cell Fluorescence Microscopy. ISBI 2009: 1127-1130 - [c88]Ihor Smal, Marco Loog, Wiro J. Niessen, Erik Meijering:
Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging. ISBI 2009: 1175-1178 - [c87]Coert Metz, Michiel Schaap, Stefan Klein, Lisan Neefjes, Ermanno Capuano, Carl J. Schultz, Robert Jan van Geuns, Patrick W. Serruys, Theo van Walsum, Wiro J. Niessen:
Patient Specific 4D Coronary Models from ECG-gated CTA Data for Intra-operative Dynamic Alignment of CTA with X-ray Images. MICCAI (1) 2009: 369-376 - [c86]Marius de Groot, Meike W. Vernooij, Stefan Klein, Alexander Leemans, Renske de Boer, Aad van der Lugt, Monique M. B. Breteler, Wiro J. Niessen:
Iterative Co-linearity Filtering and Parameterization of Fiber Tracts in the Entire Cingulum. MICCAI (1) 2009: 853-860 - 2008
- [j48]Ihor Smal, Erik Meijering, Katharina Draegestein, Niels Galjart, Ilya Grigoriev, Anna Akhmanova, M. E. van Royen, Adriaan B. Houtsmuller, Wiro J. Niessen:
Multiple object tracking in molecular bioimaging by Rao-Blackwellized marginal particle filtering. Medical Image Anal. 12(6): 764-777 (2008) - [j47]Meike W. Vernooij, Marius de Groot, Aad van der Lugt, Mohammad Arfan Ikram, Gabriel P. Krestin, Albert Hofman, Wiro J. Niessen, Monique M. B. Breteler:
White matter atrophy and lesion formation explain the loss of structural integrity of white matter in aging. NeuroImage 43(3): 470-477 (2008) - [j46]Fedde van der Lijn, Tom den Heijer, Monique M. B. Breteler, Wiro J. Niessen:
Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts. NeuroImage 43(4): 708-720 (2008) - [j45]Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro J. Niessen, Erik Meijering:
Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images: Application to Microtubule Growth Analysis. IEEE Trans. Medical Imaging 27(6): 789-804 (2008) - [j44]Michiel Schaap, Arnold M. R. Schilham, Karel J. Zuiderveld, Mathias Prokop, Evert-Jan Vonken, Wiro J. Niessen:
Fast Noise Reduction in Computed Tomography for Improved 3-D Visualization. IEEE Trans. Medical Imaging 27(8): 1120-1129 (2008) - [c85]Oleh Dzyubachyk, Wiro J. Niessen, Erik Meijering:
Advanced level-set based multiple-cell segmentation and tracking in time-lapse fluorescence microscopy images. ISBI 2008: 185-188 - [c84]Ihor Smal, Wiro J. Niessen, Erik Meijering:
A new detection scheme for multiple object tracking in fluorescence microscopy by joint probabilistic data association filtering. ISBI 2008: 264-267 - [c83]Theo van Walsum, Michiel Schaap, Coert Metz, Alina G. van der Giessen, Wiro J. Niessen:
Averaging Centerlines: Mean Shift on Paths. MICCAI (1) 2008: 900-907 - [c82]Reinhard Hameeteman, Jifke F. Veenland, Wiro J. Niessen:
Volume preserving image registration via a post-processing stage. Medical Imaging: Image Processing 2008: 69140Y - [c81]Danijela Vukadinovic, Theo van Walsum, Rashindra Manniesing, Aad van der Lugt, Thomas de Weert, Wiro J. Niessen:
AdaBoost classification for model-based segmentation of the outer wall of the common carotid artery in CTA. Medical Imaging: Image Processing 2008: 691418 - [e2]Charl P. Botha, Gordon L. Kindlmann, Wiro J. Niessen, Bernhard Preim:
Proceedings of the Eurographics Workshop on Visual Computing for Biomedicine, VCBM 2008, Delft, The Netherlands, 2008. Eurographics Association 2008, ISBN 978-3-905674-13-2 [contents] - 2007
- [j43]Henri A. Vrooman, Chris A. Cocosco, Fedde van der Lijn, Rik Stokking, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Wiro J. Niessen:
Multi-spectral brain tissue segmentation using automatically trained k-Nearest-Neighbor classification. NeuroImage 37(1): 71-81 (2007) - [j42]Tanja Alderliesten, Maurits K. Konings, Wiro J. Niessen:
Modeling Friction, Intrinsic Curvature, and Rotation of Guide Wires for Simulation of Minimally Invasive Vascular Interventions. IEEE Trans. Biomed. Eng. 54(1): 29-38 (2007) - [j41]Tanja Alderliesten, Peter A. N. Bosman, Wiro J. Niessen:
Towards a Real-Time Minimally-Invasive Vascular Intervention Simulation System. IEEE Trans. Medical Imaging 26(1): 128-132 (2007) - [j40]Rashindra Manniesing, Max A. Viergever, Wiro J. Niessen:
Vessel Axis Tracking Using Topology Constrained Surface Evolution. IEEE Trans. Medical Imaging 26(3): 309-316 (2007) - [c80]Michiel Schaap, Ihor Smal, Coert Metz, Theo van Walsum, Wiro J. Niessen:
Bayesian Tracking of Elongated Structures in 3D Images. IPMI 2007: 74-85 - [c79]Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro J. Niessen, Erik Meijering:
Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging. IPMI 2007: 110-121 - [c78]Oleh Dzyubachyk, Wiro J. Niessen, Erik Meijering:
A Variational Model for Level-set Based Cell Tracking in Time-lapse Fluorescence Microscopy Images. ISBI 2007: 97-100 - [c77]Renske de Boer, Fedde van der Lijn, Henri A. Vrooman, Meike W. Vernooij, Mohammad Arfan Ikram, Monique M. B. Breteler, Wiro J. Niessen:
Automatic Segmentation of Brain Tissue Andwhitematter Lesions in MRI. ISBI 2007: 652-655 - [c76]Coert Metz, Michiel Schaap, Alina G. van der Giessen, Theo van Walsum, Wiro J. Niessen:
Semi-Automatic Coronary Artery Centerline Extraction in Computed Tomography Angiography Data. ISBI 2007: 856-859 - [c75]Wiro J. Niessen, Everine B. van de Kraats, Shirley A. M. Baert, Theo van Walsum:
3d X-Ray Image Guidance in Interventional Radiology. ISBI 2007: 1000-1003 - [c74]Ihor Smal, Wiro J. Niessen, Erik Meijering:
Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images. ISBI 2007: 1048-1051 - [c73]Michiel Schaap, Rashindra Manniesing, Ihor Smal, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen:
Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA. MICCAI (2) 2007: 562-570 - [c72]Rashindra Manniesing, Wiro J. Niessen:
Automatic segmentation of the internal carotid arteries through the skull base. Medical Imaging: Image Processing 2007: 65120I - [c71]Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Henri A. Vrooman, Daniel Rueckert, Alexander Hammers, Monique M. B. Breteler, Wiro J. Niessen:
Automated localization of periventricular and subcortical white matter lesions. Medical Imaging: Image Processing 2007: 651232 - 2006
- [j39]Everine B. van de Kraats, Theo van Walsum, Lance Kendrick, Niels J. Noordhoek, Wiro J. Niessen:
Accuracy evaluation of direct navigation with an isocentric 3D rotational X-ray system. Medical Image Anal. 10(2): 113-124 (2006) - [j38]Rashindra Manniesing, Birgitta K. Velthuis, Maarten S. van Leeuwen, Irene C. van der Schaaf, Peter Jan van Laar, Wiro J. Niessen:
Level set based cerebral vasculature segmentation and diameter quantification in CT angiography. Medical Image Anal. 10(2): 200-214 (2006) - [j37]Rashindra Manniesing, Max A. Viergever, Wiro J. Niessen:
Vessel enhancing diffusion: A scale space representation of vessel structures. Medical Image Anal. 10(6): 815-825 (2006) - [j36]François Rousseau, Pierre Hellier, Marloes M. J. Letteboer, Wiro J. Niessen, Christian Barillot:
Quantitative Evaluation of Three Calibration Methods for 3-D Freehand Ultrasound. IEEE Trans. Medical Imaging 25(11): 1492-1501 (2006) - [c70]Rashindra Manniesing, Wiro J. Niessen:
Shape constrained vessel centerline extraction by integrating surface evolution and topology analysis. ISBI 2006: 165-168 - [c69]Ihor Smal, Wiro J. Niessen, Erik Meijering:
Bayesian tracking for fluorescence microscopic imaging. ISBI 2006: 550-553 - [c68]Lejla Alic, Jifke F. Veenland, Marion van Vliet, C. F. van Dijke, A. M. M. Eggermont, Wiro J. Niessen:
Quantification of heterogeneity in dynamic contrast enhanced MRI data for tumor treatment assessment. ISBI 2006: 944-947 - [c67]Gunnar Kedenburg, Chris A. Cocosco, Ullrich Köthe, Wiro J. Niessen, Evert-Jan Vonken, Max A. Viergever:
Automatic cardiac MRI myocardium segmentation using graphcut. Medical Imaging: Image Processing 2006: 61440A - [c66]Henri A. Vrooman, Chris A. Cocosco, Rik Stokking, Mohammad Arfan Ikram, Meike W. Vernooij, Monique M. B. Breteler, Wiro J. Niessen:
kNN-based multi-spectral MRI brain tissue classification: manual training versus automated atlas-based training. Medical Imaging: Image Processing 2006: 61443L - 2005
- [j35]Marloes Maria Johanna Letteboer, Peter W. A. Willems, Max A. Viergever, Wiro J. Niessen:
Brain shift estimation in image-guided neurosurgery using 3-D ultrasound. IEEE Trans. Biomed. Eng. 52(2): 268-276 (2005) - [j34]Sílvia Delgado Olabarriaga, Jean-Michel Rouet, Maxim Fradkin, Marcel Breeuwer, Wiro J. Niessen:
Segmentation of thrombus in abdominal aortic aneurysms from CTA with nonparametric statistical grey level appearance modeling. IEEE Trans. Medical Imaging 24(4): 477-485 (2005) - [j33]Theo van Walsum, Shirley A. M. Baert, Wiro J. Niessen:
Guide wire reconstruction and visualization in 3DRA using monoplane fluoroscopic imaging. IEEE Trans. Medical Imaging 24(5): 612-623 (2005) - [j32]Everine B. van de Kraats, Graeme P. Penney, Dejan Tomazevic, Theo van Walsum, Wiro J. Niessen:
Standardized evaluation methodology for 2-D-3-D registration. IEEE Trans. Medical Imaging 24(9): 1177-1189 (2005) - [c65]Rashindra Manniesing, Wiro J. Niessen:
Multiscale Vessel Enhancing Diffusion in CT Angiography Noise Filtering. IPMI 2005: 138-149 - [c64]Everine B. van de Kraats, Graeme P. Penney, Theo van Walsum, Wiro J. Niessen:
Multispectral MR to X-Ray Registration of Vertebral Bodies by Generating CT-Like Data. MICCAI (2) 2005: 911-918 - 2004
- [j31]Cynthia Jongen, Josien P. W. Pluim, Paul H. J. Nederkoorn, Max A. Viergever, Wiro J. Niessen:
Construction and evaluation of an average CT brain image for inter-subject registration. Comput. Biol. Medicine 34(8): 647-662 (2004) - [j30]Marleen de Bruijne, Bram van Ginneken, Max A. Viergever, Wiro J. Niessen:
Interactive segmentation of abdominal aortic aneurysms in CTA images. Medical Image Anal. 8(2): 127-138 (2004) - [j29]Michael Kaus, Jens von Berg, Jürgen Weese, Wiro J. Niessen, Vladimir Pekar:
Automated segmentation of the left ventricle in cardiac MRI. Medical Image Anal. 8(3): 245-254 (2004) - [j28]Onno Wink, Wiro J. Niessen, Max A. Viergever:
Multiscale vessel tracking. IEEE Trans. Medical Imaging 23(1): 130-133 (2004) - [j27]Graeme P. Penney, Julia A. Schnabel, Daniel Rueckert, Max A. Viergever, Wiro J. Niessen:
Registration-based interpolation. IEEE Trans. Medical Imaging 23(7): 922-926 (2004) - [j26]Babak Movassaghi, Volker Rasche, Michael Grass, Max A. Viergever, Wiro J. Niessen:
A quantitative analysis of 3-D coronary modeling from two or more projection images. IEEE Trans. Medical Imaging 23(12): 1517-1531 (2004) - [c63]Chris A. Cocosco, Thomas Netsch, Julien Sénégas, Daniel Bystrov, Wiro J. Niessen, Max A. Viergever:
Automatic cardiac region-of-interest computation in cine 3D structural MRI. CARS 2004: 1126-1131 - [c62]Sílvia Delgado Olabarriaga, Marcel Breeuwer, Wiro J. Niessen:
Segmentation of Abdominal Aortic Aneurysms with a Non-parametric Appearance Model. ECCV Workshops CVAMIA and MMBIA 2004: 257-268 - [c61]Graeme P. Penney, Krista Joosten, Marloes M. J. Letteboer, Max A. Viergever, Wiro J. Niessen:
Three-Dimensional Reconstruction of Tracked Freehand Ultrasound Using Non-Rigid Registration. ISBI 2004: 492-495 - [c60]Theo van Walsum, Everine B. van de Kraats, Bart Carelsen, Sjirk N. Boon, Niels J. Noordhoek, Wiro J. Niessen:
Accuracy of Navigation on 3DRX Data Acquired with a Mobile Propeller C-Arm. MICCAI (2) 2004: 455-461 - [c59]Sílvia Delgado Olabarriaga, Marcel Breeuwer, Wiro J. Niessen:
Multi-scale Statistical Grey Value Modelling for Thrombus Segmentation from CTA. MICCAI (1) 2004: 467-474 - [c58]Rashindra Manniesing, Wiro J. Niessen:
Local Speed Functions in Level Set Based Vessel Segmentation. MICCAI (1) 2004: 475-482 - [c57]Graeme P. Penney, Julia A. Schnabel, Daniel Rueckert, David J. Hawkes, Wiro J. Niessen:
Registration-Based Interpolation Using a High-Resolution Image for Guidance. MICCAI (1) 2004: 558-565 - [c56]Everine B. van de Kraats, Graeme P. Penney, Dejan Tomazevic, Theo van Walsum, Wiro J. Niessen:
Standardized Evaluation of 2D-3D Registration. MICCAI (1) 2004: 574-581 - [c55]Shirley A. M. Baert, Graeme P. Penney, Theo van Walsum, Wiro J. Niessen:
Precalibration Versus 2D-3D Registration for 3D Guide Wire Display in Endovascular Interventions. MICCAI (2) 2004: 577-584 - [c54]Shirley A. M. Baert, Theo van Walsum, Wiro J. Niessen:
3D guide wire tracking for navigation in endovascular interventions. Medical Imaging: Image-Guided Procedures 2004 - [c53]Cornelis M. van Bemmel, Wiro J. Niessen:
Semi-automatic segmentation and quantification of the internal carotid artery from 3D contrast-enhanced MR angiograms. Medical Imaging: Image Processing 2004 - [c52]Rashindra Manniesing, Birgitta K. Velthuis, Maarten S. van Leeuwen, Wiro J. Niessen:
Skeletonization for reinitialization in level-set-based vascular tree segmentation. Medical Imaging: Image Processing 2004 - [c51]Babak Movassaghi, Volker Rasche, Max A. Viergever, Wiro J. Niessen:
3D coronary reconstruction from calibrated motion-compensated 2D projections based on semi-automated feature point detection. Medical Imaging: Image Processing 2004 - [c50]Babak Movassaghi, Volker Rasche, Max A. Viergever, Wiro J. Niessen:
Accurate coronary modeling procedure using 2D calibrated projections based on 2D centerline points on a single projection. Medical Imaging: Image Processing 2004 - 2003
- [j25]Marleen de Bruijne, Wiro J. Niessen, J. B. Antoine Maintz, Max A. Viergever:
Localization and Segmentation of Aortic Endografts using Marker Detection. IEEE Trans. Medical Imaging 22(4): 473-482 (2003) - [j24]Cornelis M. van Bemmel, Onno Wink, Bert Verdonck, Max A. Viergever, Wiro J. Niessen:
Blood Pool Contrast Enhanced MRA: Improved Arterial Visualization in the Steady State. IEEE Trans. Medical Imaging 22(5): 645-652 (2003) - [j23]Jon Sporring, Wiro J. Niessen, Joachim Weickert:
Growth and Motion in Three-Dimensional Images. IEEE Trans. Medical Imaging 22(6): 697-698 (2003) - [j22]Shirley A. M. Baert, Max A. Viergever, Wiro J. Niessen:
Guide Wire Tracking During Endovascular Interventions. IEEE Trans. Medical Imaging 22(8): 965-972 (2003) - [j21]Cornelis M. van Bemmel, Luuk J. Spreeuwers, Max A. Viergever, Wiro J. Niessen:
Level-Set Based Artery-Vein Separation in Blood Pool Agent CE-MR Angiograms. IEEE Trans. Medical Imaging 22(10): 1224-1234 (2003) - [j20]Shirley A. M. Baert, Everine B. van de Kraats, Theo van Walsum, Max A. Viergever, Wiro J. Niessen:
3D Guide Wire Reconstruction from Biplane Image Sequence for Integrated Display fin 3D Vasculature. IEEE Trans. Medical Imaging 22(10): 1252-1258 (2003) - [c49]Marloes M. J. Letteboer, Max A. Viergever, Wiro J. Niessen:
Rigid registration of 3D ultrasound data of brain tumours. CARS 2003: 433-439 - [c48]Babak Movassaghi, Volker Rasche, Raoul Florent, Max A. Viergever, Wiro J. Niessen:
3D coronary reconstruction from calibrated motion-compensated 2D projections. CARS 2003: 1079-1084 - [c47]Sílvia Delgado Olabarriaga, Wiro J. Niessen, Marcel Breeuwer:
Evaluation of Hessian-based filters to enhance the axis of coronary arteries in CT images. CARS 2003: 1191-1196 - [c46]Babak Movassaghi, Volker Rasche, Max A. Viergever, Wiro J. Niessen:
Non-ECG gated 3D-rotational coronary angiography. CARS 2003: 1396 - [c45]Alejandro F. Frangi, Daniel Rueckert, Julia A. Schnabel, Wiro J. Niessen:
Automatic Construction of Biventricular Statistical Shape Models. FIMH 2003: 18-29 - [c44]Marleen de Bruijne, Bram van Ginneken, Max A. Viergever, Wiro J. Niessen:
Adapting Active Shape Models for 3D Segmentation of Tubular Structures in Medical Images. IPMI 2003: 136-147 - [c43]Marloes M. J. Letteboer, Peter W. A. Willems, Max A. Viergever, Wiro J. Niessen:
Non-rigid Registration of 3D Ultrasound Images of Brain Tumours Acquired during Neurosurgery. MICCAI (2) 2003: 408-415 - [c42]Michael Kaus, Jens von Berg, Wiro J. Niessen, Vladimir Pekar:
Automated Segmentation of the Left Ventricle in Cardiac MRI. MICCAI (1) 2003: 432-439 - [c41]Marleen de Bruijne, Bram van Ginneken, Lambertus W. Bartels, Maarten J. van der Laan, Jan D. Blankensteijn, Wiro J. Niessen, Max A. Viergever:
Automated Segmentation of Abdominal Aortic Aneurysms in Multi-spectral MR Images. MICCAI (2) 2003: 538-545 - [c40]Sílvia Delgado Olabarriaga, Marcel Breeuwer, Wiro J. Niessen:
Minimum Cost Path Algorithm for Coronary Artery Central Axis Tracking in CT Images. MICCAI (2) 2003: 687-694 - [c39]Theo van Walsum, Shirley A. M. Baert, Wiro J. Niessen:
Three-dimensional guide wire visualization from 3DRA using monoplane fluoroscopic imaging. Medical Imaging: Image-Guided Procedures 2003 - [c38]Marleen de Bruijne, Bram van Ginneken, Wiro J. Niessen, Marco Loog, Max A. Viergever:
Model-based segmentation of abdominal aortic aneurysms in CTA images. Medical Imaging: Image Processing 2003 - [c37]Everine Brenda van de Kraats, Theo van Walsum, Jorrit-Jan Verlaan, Wiro J. Niessen:
Noninvasive MR to 3D Rotational x-ray registration of vetebral bodies. Medical Imaging: Image Processing 2003 - [c36]Kirsten Meetz, Jens von Berg, Thomas Netsch, Vladimir Pekar, Steven Lobregt, Roel Truyen, Miriam Siers, Wiro J. Niessen, Michael R. Kaus:
Coupled deformable models with spatially varying features for quantitative assessment of left ventricular function from cardiac MRI. Medical Imaging: Image Processing 2003 - 2002
- [j19]Erik Meijering, Wiro J. Niessen, Joachim Weickert, Max A. Viergever:
Diffusion-enhanced visualization and quantification of vascular anomalies in three-dimensional rotational angiography: Results of an in-vitro evaluation. Medical Image Anal. 6(3): 215-233 (2002) - [j18]Alejandro F. Frangi, Daniel Rueckert, Julia A. Schnabel, Wiro J. Niessen:
Automatic Construction of Multiple-object Three-dimensional Statistical Shape Models: Application to Cardiac Modelling. IEEE Trans. Medical Imaging 21(9): 1151-1166 (2002) - [c35]Wiro J. Niessen, Cornelis M. van Bemmel, Alejandro F. Frangi, M. J. A. Siers, Onno Wink:
Model-based segmentation of cardiac and vascular images. ISBI 2002: 22-25 - [c34]Cornelis M. van Bemmel, Luuk J. Spreeuwers, Max A. Viergever, Wiro J. Niessen:
Level-Set Based Carotid Artery Segmentation for Stenosis Grading. MICCAI (2) 2002: 36-43 - [c33]Shirley A. M. Baert, Wiro J. Niessen:
2D Guide Wire Tracking during Endovascular Interventions. MICCAI (2) 2002: 101-108 - [c32]Tanja Alderliesten, Maurits K. Konings, Wiro J. Niessen:
Simulation of Guide Wire Propagation for Minimally Invasive Vascular Interventions. MICCAI (2) 2002: 245-252 - [c31]Shirley A. M. Baert, Everine B. van de Kraats, Wiro J. Niessen:
3D Guide Wire Reconstruction from Biplane Image Sequences for 3D Navigation in Endovascular Interventions. MICCAI (1) 2002: 404-410 - [c30]Cornelis M. van Bemmel, Luuk J. Spreeuwers, Bert Verdonck, Max A. Viergever, Wiro J. Niessen:
Blood pool agent contrast-enhanced MRA: level-set-based artery-vein separation. Medical Imaging: Image Processing 2002 - [c29]Marleen de Bruijne, Bram van Ginneken, Wiro J. Niessen, J. B. Antoine Maintz, Max A. Viergever:
Active-shape-model-based segmentation of abdominal aortic aneurysms in CTA images. Medical Imaging: Image Processing 2002 - 2001
- [j17]Alejandro F. Frangi, Michael Egmont-Petersen, Wiro J. Niessen, Johan H. C. Reiber, Max A. Viergever:
Bone tumor segmentation from MR perfusion images with neural networks using multi-scale pharmacokinetic features. Image Vis. Comput. 19(9-10): 679-690 (2001) - [j16]Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever:
Quantitative evaluation of convolution-based methods for medical image interpolation. Medical Image Anal. 5(2): 111-126 (2001) - [j15]Alejandro F. Frangi, Wiro J. Niessen, Max A. Viergever:
Three-Dimensional Modeling for Functional Analysis of Cardiac Images: A Review. IEEE Trans. Medical Imaging 20(1): 2-5 (2001) - [j14]Wiro J. Niessen:
Geometric Partial Differential Equations and Image Analysis. IEEE Trans. Medical Imaging 20(12): 1426-1427 (2001) - [c28]Alejandro F. Frangi, Daniel Rueckert, Julia A. Schnabel, Wiro J. Niessen:
Automatic 3D ASM Construction via Atlas-Based Landmarking and Volumetric Elastic Registration. IPMI 2001: 78-91 - [c27]Erik Meijering, Wiro J. Niessen, Joachim Weickert, Max A. Viergever:
Evaluation of Diffusion Techniques for Improved Vessel Visualization and Quantification in Three-Dimensional Rotational Angiography. MICCAI 2001: 177-185 - [c26]Cornelis M. van Bemmel, Wiro J. Niessen, Onno Wink, Bert Verdonck, Max A. Viergever:
Blood Pool Agent CE-MRA: Improved Arterial Visualization of the Aortoiliac Vasculature in the Steady-State Using First-Pass Data. MICCAI 2001: 699-706 - [c25]Onno Wink, Wiro J. Niessen, Bert Verdonck, Max A. Viergever:
Vessel Axis Determination Using Wave Front Propagation Analysis. MICCAI 2001: 845-853 - [c24]Tanja Alderliesten, Wiro J. Niessen, Koen L. Vincken, J. B. Antoine Maintz, Floor Jansen, Onno van Nieuwenhuizen, Max A. Viergever:
Objective and reproducible segmentation and quantification of tuberous sclerosis lesions in FLAIR brain MR images. Medical Imaging: Image Processing 2001 - [c23]Marleen de Bruijne, Wiro J. Niessen, J. B. Antoine Maintz, Max A. Viergever:
Semiautomatic aortic endograft localization for postoperative evaluation of endovascular aneurysm treatment. Medical Imaging: Image Processing 2001 - [e1]Wiro J. Niessen, Max A. Viergever:
Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001, 4th International Conference, Utrecht, The Netherlands, October 14-17, 2001, Proceedings. Lecture Notes in Computer Science 2208, Springer 2001, ISBN 3-540-42697-3 [contents] - 2000
- [j13]Onno Wink, Wiro J. Niessen, Max A. Viergever:
Fast Delineation and Visualization of Vessels in 3D Angiographic Images. IEEE Trans. Medical Imaging 19(4): 337-346 (2000) - [j12]Michael Abramoff, Wiro J. Niessen, Max A. Viergever:
Objective Quantifications of the Motion of Orbital Soft Tissues. IEEE Trans. Medical Imaging 19(10): 986-995 (2000) - [c22]Michael Egmont-Petersen, Alejandro F. Frangi, Wiro J. Niessen, P. C. W. Hogendoorn, Johan L. Bloem, Max A. Viergever, Johan H. C. Reiber:
Segmentation of Bone Tumor in MR Perfusion Images Using Neural Networks and Multiscale Pharmacokinetic Features. ICPR 2000: 4080-4083 - [c21]Onno Wink, Wiro J. Niessen, Max A. Viergever:
Minimum Cost Path Determination Using a Simple Heuristic Function. ICPR 2000: 7010-7013 - [c20]Shirley A. M. Baert, Wiro J. Niessen, Erik H. W. Meijering, Alejandro F. Frangi, Max A. Viergever:
Guide Wire Tracking During Endovascular Interventions. MICCAI 2000: 727-734 - [c19]Wiro J. Niessen:
Vascular Image Processing. SIBGRAPI 2000: 3-6
1990 – 1999
- 1999
- [j11]Wiro J. Niessen, Koen L. Vincken, Joachim Weickert, Bart M. ter Haar Romeny, Max A. Viergever:
Multiscale Segmentation of Three-Dimensional MR Brain Images. Int. J. Comput. Vis. 31(2-3): 185-202 (1999) - [j10]Luc Florack, Robert Maas, Wiro J. Niessen:
Pseudo-Linear Scale-Space Theory. Int. J. Comput. Vis. 31(2-3): 247-259 (1999) - [j9]Mads Nielsen, Robert Maas, Wiro J. Niessen, Luc Florack, Bart M. ter Haar Romeny:
Binocular Stereo from Grey-Scale Images. J. Math. Imaging Vis. 10(2): 103-122 (1999) - [j8]Alejandro F. Frangi, Wiro J. Niessen, Romhild M. Hoogeveen, Theo van Walsum, Max A. Viergever:
Model-Based Quantitation of 3D Magnetic Resonance Angiographic Images. IEEE Trans. Medical Imaging 18(10): 946-956 (1999) - [j7]Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever:
Retrospective Motion Correction in Digital Subtraction Angiography: A Review. IEEE Trans. Medical Imaging 18(18): 2-21 (1999) - [c18]Erik H. W. Meijering, Karel J. Zuiderveld, Wiro J. Niessen, Max A. Viergever:
A Fast Image Registration Technique for Motion Artifact Reduction in DSA. ICIP (3) 1999: 435-439 - [c17]Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever:
Piecewise Polynomial Kernels for Image Interpolation: A Generalization of Cubic Convolution. ICIP (3) 1999: 647-651 - [c16]Erik H. W. Meijering, Wiro J. Niessen, Max A. Viergever:
The Sinc-Approximating Kernels of Classical Polynomial Interpolation. ICIP (3) 1999: 652-656 - [c15]Wiro J. Niessen, Alexander Montauban van Swijndregt, Bernard Elsman, Onno Wink, Max A. Viergever, Willem Mali:
Enhanced Artery Visualization in Blood Pool MRA: Results in the Peripheral Vasculature. IPMI 1999: 340-345 - [c14]Erik H. W. Meijering, Wiro J. Niessen, Josien P. W. Pluim, Max A. Viergever:
Quantitative Comparison of Sinc-Approximating Kernels for Medical Image Interpolation. MICCAI 1999: 210-217 - [c13]Alejandro F. Frangi, Wiro J. Niessen, Romhild M. Hoogeveen, Theo van Walsum, Max A. Viergever:
Quantitation of Vessel Morphology from 3D MRA. MICCAI 1999: 358-367 - 1998
- [j6]Luc Florack, Wiro J. Niessen, Mads Nielsen:
The Intrinsic Structure of Optic Flow Incorporating Measurement Duality. Int. J. Comput. Vis. 27(3): 263-286 (1998) - [j5]Wiro J. Niessen, Bart M. ter Haar Romeny, Max A. Viergever:
Geodesic Deformable Models for Medical Image Analysis. IEEE Trans. Medical Imaging 17(4): 634-641 (1998) - [c12]Wiro J. Niessen, Koen L. Vincken, Joachim Weickert, Max A. Viergever:
Three Dimensional MR Brain Segmentation. ICCV 1998: 53-58 - [c11]Alejandro F. Frangi, Wiro J. Niessen, Koen L. Vincken, Max A. Viergever:
Muliscale Vessel Enhancement Filtering. MICCAI 1998: 130-137 - [c10]Onno Wink, Wiro J. Niessen, Max A. Viergever:
Fast Quantification of Abdominal Aortic Aneurysms from CTA Volumes. MICCAI 1998: 138-145 - [c9]Wiro J. Niessen, Carolien J. Bouma, Koen L. Vincken, Max A. Viergever:
Error Metrics for Quantitative Evaluation of Medical Image Segmentation. Theoretical Foundations of Computer Vision 1998: 275-284 - 1997
- [j4]Wiro J. Niessen, James S. Duncan, Mads Nielsen, Luc Florack, Bart M. ter Haar Romeny, Max A. Viergever:
Multiscale Approach to Image Sequence Analysis. Comput. Vis. Image Underst. 65(2): 259-268 (1997) - [j3]Wiro J. Niessen, Koen L. Vincken, Joachim Weickert, Max A. Viergever:
Nonlinear Multiscale Representations for Image Segmentation. Comput. Vis. Image Underst. 66(2): 233-245 (1997) - [j2]Wiro J. Niessen, Bart M. ter Haar Romeny, Luc Florack, Max A. Viergever:
A General Framework for Geometry-Driven Evolution Equations. Int. J. Comput. Vis. 21(3): 187-205 (1997) - [j1]Carolien J. Bouma, Wiro J. Niessen, Karel J. Zuiderveld, Elma J. Gussenhoven, Max A. Viergever:
Automated lumen definition from 30 MHz intravascular ultrasound images. Medical Image Anal. 1(4): 363-377 (1997) - [c8]Joachim Weickert, Karel J. Zuiderveld, Bart M. ter Haar Romeny, Wiro J. Niessen:
Parallel Implementations of AOS Schemes: A Fast Way of Nonlinear Diffusion Filtering. ICIP (3) 1997: 396-399 - [c7]Wiro J. Niessen, A. M. López, W. J. van Enk, P. M. v. Roermund, Bart M. ter Haar Romeny, Max A. Viergever:
In Vivo Analysis of Trabecular Bone Architecture. IPMI 1997: 435-440 - [c6]Mads Nielsen, Wiro J. Niessen, Robert Maas, Luc Florack, Bart M. ter Haar Romeny:
On the Duality of Scalar and Density Flows. Scale-Space 1997: 65-76 - [c5]Freek J. Beekman, Ed T. P. Slijpen, Wiro J. Niessen:
Supervised Diffusion Parameter Selection for Filtering SPECT Brain Images. Scale-Space 1997: 164-175 - [p2]Wiro J. Niessen, Robert Maas:
Optic Flow and Stereo. Gaussian Scale-Space Theory 1997: 31-42 - 1996
- [c4]Koen L. Vincken, Wiro J. Niessen, Max A. Viergever:
Blurring Strategies for Image Segmentation Using a Multiscale Linking Model. CVPR 1996: 21-26 - [c3]Carolien J. Bouma, Wiro J. Niessen, Karel J. Zuiderveld, Elma J. Gussenhoven, Max A. Viergever:
Evaluation of Segmentation Algorithms for Intravascular Ultrasound Images. VBC 1996: 203-212 - 1994
- [c2]Wiro J. Niessen, Bart M. ter Haar Romeny, Luc Florack, Alfons H. Salden, Max A. Viergever:
Nonlinear diffusion of scalar images using well-posed differential operators. CVPR 1994: 92-97 - [c1]Bart M. ter Haar Romeny, Wiro J. Niessen, Janita Wilting, Luc Florack:
Differatial Structure of Images: Accuracy of Representation. ICIP (1) 1994: 21-25 - [p1]Wiro J. Niessen, Bart M. ter Haar Romeny, Max A. Viergever:
Numerical Analysis of Geometry-Driven Diffusion Equations. Geometry-Driven Diffusion in Computer Vision 1994: 393-410
Coauthor Index
Esther Bron
aka: Esther E. Bron
aka: Esther E. Bron
[j128] [j127] [j123] [i27] [j120] [j118] [c179] [c176] [c175] [c174] [c173] [i17] [i16] [i15] [i14] [i11] [i10] [i8] [c160] [c157] [i4] [j95] [j86] [j82] [c136] [c134] [j71] [j69] [j68] [j67] [c132] [c131] [c128] [c124] [j64] [j62] [c115] [c113] [c111] [c104] [c101] [c99] [c93] [j30] [j25] [c44] [c41] [c38] [c29] [c23]
Reinhard Hameeteman
aka: K. Hameeteman
aka: K. Hameeteman
[j135] [j132] [j131] [c184] [d1] [j127] [j125] [j123] [j122] [i25] [i20] [i18] [j120] [j118] [j116] [j115] [j114] [c174] [c173] [c172] [i16] [i14] [i13] [i12] [j111] [j110] [c170] [i10] [i8] [c165] [c164] [c160] [i4] [c155] [j80] [c134] [j71] [c132] [c128] [j63] [c113] [j58] [j50] [j47] [j43] [c77] [c71] [c66]
[d2] [i36] [i35] [j138] [c186] [i32] [i31] [j135] [j134] [j133] [j132] [j131] [c184] [i30] [i28] [c182] [c180] [i26] [i24] [i22] [i21] [i20] [i19] [i18] [j117] [j113] [c179] [c177] [c172] [i17] [i12] [j112] [j111] [c169] [c168] [i7] [j106] [j104] [c166] [c163] [c158] [i5] [j99] [c156] [c155] [j91] [j88] [j87] [c153] [c146] [c145] [c144] [c143] [c142] [c141] [c140] [j83] [j80] [j79] [j78] [c137] [c136] [c135] [j77] [j75] [j74] [j72] [j71] [j69] [j68] [c131] [c128] [c120] [c119] [c118] [j66] [c117] [c115] [c114] [c110] [c108] [c106] [c105] [c104] [c96] [c93] [c90] [c87] [c86]
Everine B. van de Kraats
aka: Everine Brenda van de Kraats
aka: Everine Brenda van de Kraats
[j143] [i37] [j141] [c188] [i33] [j137] [j130] [j124] [j121] [i23] [i19] [j116] [c161] [j95] [j94] [j86] [j83] [c136] [j77] [j72] [j71] [j70] [j69] [c132] [c131] [c129] [c128] [c124] [c120] [c118] [j65] [j63] [c115] [c108] [c107] [j59] [j58] [j56] [c105] [c104] [c99] [c97] [j50] [c91] [c86] [j47] [c81] [c73]
Erik Meijering
aka: Erik H. W. Meijering
aka: Erik H. W. Meijering
Coert Metz
aka: Coert T. Metz
aka: Coert T. Metz
Gennady Roshchupkin
aka: Gennady V. Roshchupkin
aka: Gennady V. Roshchupkin
Daniel Ruijters
aka: Danny Ruijters
aka: Danny Ruijters
[i34] [j135] [j132] [j131] [c184] [j128] [j127] [j125] [j123] [j122] [i27] [i25] [i20] [i18] [j120] [j118] [j116] [j115] [j114] [c175] [c174] [c173] [c172] [i16] [i15] [i14] [i13] [i12] [j111] [j110] [c170] [i10] [i8] [c165] [c164] [c162] [c160] [i4] [c155] [c154] [j80] [c134] [j71] [j70] [c132] [c128] [j63] [c113] [j58] [j50] [c86] [j47] [j43] [c77] [c71] [c66]
[j40] [j37] [c67] [j35] [j31] [j30] [j28] [j27] [j26] [c63] [c61] [c51] [c50] [j25] [j24] [j22] [j21] [j20] [c49] [c48] [c46] [c44] [c43] [c41] [c38] [j19] [c34] [c30] [c29] [j17] [j16] [j15] [c27] [c26] [c25] [c24] [c23] [e1] [j13] [j12] [c22] [c21] [c20] [j11] [j8] [j7] [c18] [c17] [c16] [c15] [c14] [c13] [j5] [c12] [c11] [c10] [c9] [j4] [j3] [j2] [j1] [c7] [c4] [c3] [c2] [p1]
[j143] [i37] [j142] [j141] [j140] [c189] [c188] [i33] [j139] [j137] [j136] [c187] [j130] [j129] [j121] [c181] [i23] [j119] [c171] [j109] [j105] [j103] [c159] [e3] [i3] [j102] [j96] [j94] [j93] [j92] [j90] [c152] [c151] [j85] [c149] [c148] [c139] [j83] [j82] [j81] [j78] [j76] [j72] [j68] [j67] [c133] [c130] [c129] [c126] [c123] [j66] [j65] [j64] [j62] [c114] [c109] [c108] [c107] [j56] [c106] [c105] [c98] [c96] [j51] [c94] [c91] [c90] [c87] [c83] [c81] [c80] [c76] [c75] [c73] [j39] [j33] [j32] [c64] [c60] [c56] [c55] [c54] [j20] [c39] [c37] [j8] [c13]
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