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2020 – today
- 2024
[i1]Alexander Kanitz
, Matthew H. McLoughlin, Liam Beckman, Venkat S. Malladi, Kyle Ellrott:
The GA4GH Task Execution API: Enabling Easy Multi Cloud Task Execution. CoRR abs/2405.00013 (2024)- 2023
- [d1]John N. Weinstein, Eric A. Collisson, Gordon B. Mills, Kenna R. Mills Shaw, Brad A. Ozenberger, Kyle Ellrott, Ilya Shmulevich, Chris Sander, Joshua M. Stuart:
TCGA Kidney Cancers. UCI Machine Learning Repository, 2023
- 2020
- [j9]Mary A Wood, Austin Nguyen, Adam J. Struck, Kyle Ellrott, Abhinav Nellore, Reid F. Thompson:
neoepiscope improves neoepitope prediction with multivariant phasing. Bioinform. 36(3): 713-720 (2020)
2010 – 2019
- 2018
- [j8]Dorota H. Sendorek, Cristian Caloian, Kyle Ellrott, J. Christopher Bare, Takafumi N. Yamaguchi, Adam D. Ewing, Kathleen E. Houlahan, Thea C. Norman, Adam A. Margolin, Joshua M. Stuart, Paul C. Boutros:
Germline contamination and leakage in whole genome somatic single nucleotide variant detection. BMC Bioinform. 19(1): 28:1-28:9 (2018) - [j7]Christopher I Cooper, Delia Yao, Dorota H. Sendorek, Takafumi N. Yamaguchi, Christine P'ng, Kathleen E. Houlahan, Cristian Caloian, Michael Fraser, Kyle Ellrott, Adam A. Margolin, Robert G. Bristow, Joshua M. Stuart, Paul C. Boutros:
Valection: design optimization for validation and verification studies. BMC Bioinform. 19(1): 339:1-339:11 (2018) - 2013
- [j6]Mary Goldman, Brian Craft, Teresa Swatloski, Kyle Ellrott, Melissa S. Cline, Mark Diekhans, Singer Ma, Chris Wilks, Joshua M. Stuart, David Haussler, Jingchun Zhu:
The UCSC Cancer Genomics Browser: update 2013. Nucleic Acids Res. 41(Database-Issue): 949-954 (2013) - 2011
- [j5]Kyle Ellrott, Christian M. Zmasek, Dana Weekes, S. Sri Krishna, Constantina Bakolitsa, Adam Godzik, John C. Wooley:
TOPSAN: a dynamic web database for structural genomics. Nucleic Acids Res. 39(Database-Issue): 494-496 (2011) - 2010
- [j4]Kyle Ellrott, Lukasz Jaroszewski, Weizhong Li, John C. Wooley, Adam Godzik:
Expansion of the Protein Repertoire in Newly Explored Environments: Human Gut Microbiome Specific Protein Families. PLoS Comput. Biol. 6(6) (2010)
2000 – 2009
- 2008
- [j3]Kyle Ellrott, Jun-tao Guo, Victor Olman, Ying Xu:
Improving the Performance of protein Threading Using Insertion/Deletion Frequency Arrays. J. Bioinform. Comput. Biol. 6(3): 585-602 (2008) - 2004
- [j2]Jun-tao Guo, Kyle Ellrott, Won Jae Chung, Dong Xu, Sergei Passovets, Ying Xu:
PROSPECT-PSPP: an automatic computational pipeline for protein structure prediction. Nucleic Acids Res. 32(Web-Server-Issue): 522-525 (2004) - 2003
- [j1]Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott, Li Wang, Inna Vokler, Philip F. LoCascio, Dong Xu, Ying Xu:
A computational pipeline for protein structure prediction and analysis at genome scale. Bioinform. 19(15): 1985-1996 (2003) - [c2]Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott, Li Wang, Inna Vokler, Philip F. LoCascio, Dong Xu, Ying Xu:
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale. BIBE 2003: 3-10 - 2002
- [c1]Kyle Ellrott, Chuhu Yang, Frances M. Sladek, Tao Jiang:
Identifying transcription factor binding sites through Markov chain optimization. ECCB 2002: 100-109
Coauthor Index
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