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2020 – today
- 2024
[j17]Bernd Flemisch, Sibylle Hermann
, Melanie Herschel, Dirk Pflüger, Jürgen Pleiss, Jan Range, Sarbani Roy, Makoto Takamoto, Benjamin Uekermann:
Research Data Management in Simulation Science: Infrastructure, Tools, and Applications. Datenbank-Spektrum 24(2): 97-105 (2024)- [j16]Felix Neubauer, Paul Bredl, Minye Xu, Keyuriben Patel, Jürgen Pleiss, Benjamin Uekermann:
MetaConfigurator: A User-Friendly Tool for Editing Structured Data Files. Datenbank-Spektrum 24(2): 161-169 (2024) - 2023
- [c11]Alexander S. Behr, Elnaz Abbaspour, Katrin Rosenthal, Jürgen Pleiss, Norbert Kockmann:
Ontology-Based Laboratory Data Acquisition With EnzymeML for Process Simulation of Biocatalytic Reactors. CoRDI 2023 - 2021
- [j15]Karsten Schatz, Florian Frieß, Marco Schäfer, Patrick C. F. Buchholz, Jürgen Pleiss, Thomas Ertl, Michael Krone:
Analyzing the similarity of protein domains by clustering Molecular Surface Maps. Comput. Graph. 99: 114-127 (2021) - [j14]Karsten Schatz, Juan José Franco-Moreno, Marco Schäfer, Alexander S. Rose, Valerio Ferrario, Jürgen Pleiss, Pere-Pau Vázquez, Thomas Ertl, Michael Krone:
Visual Analysis of Large-Scale Protein-Ligand Interaction Data. Comput. Graph. Forum 40(6): 394-408 (2021) - 2020
- [j13]Gudrun Gygli, Jürgen Pleiss:
Simulation Foundry: Automated and F.A.I.R. Molecular Modeling. J. Chem. Inf. Model. 60(4): 1922-1927 (2020)
2010 – 2019
- 2019
- [c10]Karsten Schatz, Michael Krone, Tabea L. Bauer, Valerio Ferrario, Jürgen Pleiss, Thomas Ertl:
Molecular Sombreros: Abstract Visualization of Binding Sites within Proteins. VCBM 2019: 225-237 - [d1]Karsten Schatz, Michael Krone, Tabea L. Bauer, Valerio Ferrario, Jürgen Pleiss, Thomas Ertl:
Molecular Sombreros of 1CRL. IEEE DataPort, 2019
- 2017
- [j12]Michael Krone, Florian Friess, Katrin Scharnowski, Guido Reina, Silvia Fademrecht, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl:
Molecular Surface Maps. IEEE Trans. Vis. Comput. Graph. 23(1): 701-710 (2017) - 2014
- [j11]Katrin Scharnowski, Michael Krone, Guido Reina, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl:
Comparative Visualization of Molecular Surfaces Using Deformable Models. Comput. Graph. Forum 33(3): 191-200 (2014) - 2013
- [j10]Michael Krone, Guido Reina, Christoph Schulz, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl:
Interactive Extraction and Tracking of Biomolecular Surface Features. Comput. Graph. Forum 32(3): 331-340 (2013) - 2011
- [j9]Demet Sirim, Florian Wagner, Lei Wang, Rolf D. Schmid, Jürgen Pleiss:
The Laccase Engineering Database: a classification and analysis system for laccases and related multicopper oxidases. Database J. Biol. Databases Curation 2011 (2011) - [j8]Michael Krone, Martin Falk, Sascha Rehm, Jürgen Pleiss, Thomas Ertl:
Interactive Exploration of Protein Cavities. Comput. Graph. Forum 30(3): 673-682 (2011) - [j7]Christian C. Gruber, Jürgen Pleiss:
Systematic benchmarking of large molecular dynamics simulations employing GROMACS on massive multiprocessing facilities. J. Comput. Chem. 32(4): 600-606 (2011)
2000 – 2009
- 2009
- [j6]Michael Knoll, Thomas M. Hamm, Florian Wagner, Virginia Martinez, Jürgen Pleiss:
The PHA Depolymerase Engineering Database: A systematic analysis tool for the diverse family of polyhydroxyalkanoate (PHA) depolymerases. BMC Bioinform. 10 (2009) - 2008
- [j5]Katrin Bidmon, Sebastian Grottel, Fabian Bös, Jürgen Pleiss, Thomas Ertl:
Visual Abstractions of Solvent Pathlines near Protein Cavities. Comput. Graph. Forum 27(3): 935-942 (2008) - 2007
- [j4]Markus Fischer, Michael Knoll, Demet Sirim, Florian Wagner, Sonja Funke, Jürgen Pleiss:
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family. Bioinform. 23(15): 2015-2017 (2007) - [c9]Katrin Bidmon, Guido Reina, Fabian Bös, Jürgen Pleiss, Thomas Ertl:
Time-Based Haptic Analysis of Protein Dynamics. WHC 2007: 537-542 - 2006
- [j3]Markus Fischer, Quan K. Thai, Melanie Grieb, Jürgen Pleiss:
DWARF - a data warehouse system for analyzing protein families. BMC Bioinform. 7: 495 (2006) - [c8]Natalia Currle-Linde, Panagiotis A. Adamidis, Michael M. Resch, Fabian Bös, Jürgen Pleiss:
GriCoL: A Language for Scientific Grids. e-Science 2006: 62 - 2005
- [c7]Alexander Seifert, Michael Krahn, Stephan Tatzel, Rolf D. Schmid, Jürgen Pleiss:
A Model of Specificity and Selectivity of Mammalian Cytochrome P450 Monooxy-genases. German Conference on Bioinformatics 2005: 147-157 - 2004
- [j2]Sandra Barth, Markus Fischer, Rolf D. Schmid, Jürgen Pleiss:
The database of epoxide hydrolases and haloalkane dehalogenases: one structure, many functions. Bioinform. 20(16): 2845-2847 (2004) - [c6]Fabian Bös, Natalia Currle-Linde, Peggy Lindner, Rolf D. Schmid, Jürgen Pleiss:
High-throughput molecular dynamics simulations: Long and short range effects of mutations on substrate specificity. German Conference on Bioinformatics 2004: 123-130 - 2003
- [j1]Markus Fischer, Jürgen Pleiss:
The Lipase Engineering Database: a navigation and analysis tool for protein families. Nucleic Acids Res. 31(1): 319-321 (2003) - 2001
- [c5]Jürgen Pleiss, Christian Gentner, Holger Scheib, Tanja Schulz, Rolf D. Schmid:
From sequence to function: a quantitative model of lipase enantioselectivity. German Conference on Bioinformatics 2001: 217
1990 – 1999
- 1999
- [c4]Markus Fischer, Tanja Schulz, Jürgen Pleiss, Rolf D. Schmid:
Understanding the sequence-structure-function relationship of lipases. German Conference on Bioinformatics 1999: 188 - 1998
- [c3]Robert C. Drees, Jürgen Pleiss, Rolf D. Schmid, Dieter Roller:
Integrating Molecular Modeling Tools and Virtual Reality Engines: An Architecture for a Highly Immersive Molecular Modeling (HIMM) Environment. Computer Graphics International 1998: 391-392 - [c2]Markus Fischer, Christoph Kaiser, Jürgen Pleiss, Rolf D. Schmid:
Lipase Engineering Database. German Conference on Bioinformatics 1998 - 1996
- [c1]Robert C. Drees, Jürgen Pleiss, Rolf D. Schmid:
Highly Immersive Molecular Modeling (HIMM): An Architecture for the Integration of Molecular Modeling and Virtual Reality. German Conference on Bioinformatics 1996: 190-192
Coauthor Index
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