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ORCIDJens Krüger 0002
Person information
- affiliation: University of Tübingen, Wilhelm Schickard Institute for Computer Science, Germany
- affiliation (former): University of Paderborn, Department of Chemistry, Germany
Other persons with the same name
- Jens Krüger 0001 — Technical University of Munich, Germany
- Jens Krüger 0003 — Hasso Plattner Institute, Potsdam
- Jens Krüger 0004 — Fraunhofer ITWM, Kaiserslautern, Germany
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2020 – today
- 2021
[j25]Maximilian Hanussek
, Felix Bartusch, Jens Krüger:
Performance and scaling behavior of bioinformatic applications in virtualization environments to create awareness for the efficient use of compute resources. PLoS Comput. Biol. 17(7) (2021)- 2020
- [j24]Maximilian Hanussek, Felix Bartusch, Jens Krüger:
BOOTABLE: Bioinformatics benchmark tool suite for applications and hardware. Future Gener. Comput. Syst. 102: 1016-1026 (2020) - [c22]Beatrice Giuliari, Manuel Kösters, Jan Zhou, Tim Dingersen, André J. Heissmann, Ralf Rotzoll, Jens Krüger, Alejandro Giorgetti, Björn Sommer:
The Vesicle Builder - A Membrane Packing Algorithm for the CELLmicrocosmos MembraneEditor. MolVa@Eurographics/EuroVis 2020: 7-15
2010 – 2019
- 2019
- [c21]Maximilian Hanussek, Felix Bartusch, Jens Krüger, Oliver Kohlbacher:
BOOTABLE: Bioinformatics Benchmark Tool Suite. CCGRID 2019: 157-160 - [c20]Felix Bartusch, Maximilian Hanussek, Jens Krüger, Oliver Kohlbacher:
Reproducible Scientific Workflows for High Performance and Cloud Computing. CCGRID 2019: 161-164 - [c19]Felix Bartusch, Jens Krüger, Klaus Rechert, Oleg Zharkov, Kyryll Udod:
CiTAR - Citing & Archiving Research. IWSG 2019 - [i2]Peter Belmann, Björn Fischer, Jan Krüger, Michal Procházka, Helena Rasche, Manuel Prinz, Maximilian Hanussek, Martin Lang, Felix Bartusch, Benjamin Gläßle, Jens Krüger, Alfred Pühler, Alexander Sczyrba:
de.NBI Cloud federation through ELIXIR AAI. F1000Research 8: 842 (2019) - 2018
- [j23]Sandra Gesing, Rion Dooley, Marlon E. Pierce, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, Alexander Hoffmann:
Gathering requirements for advancing simulations in HPC infrastructures via science gateways. Future Gener. Comput. Syst. 82: 544-554 (2018) - [c18]Felix Bartusch, Maximilian Hanussek, Jens Krüger:
Automatic Generation of Provenance Metadata during Execution of Scientific Workflows. IWSG 2018 - 2017
- [j22]Richard Grunzke, Jens Krüger, René Jäkel, Wolfgang E. Nagel, Sonja Herres-Pawlis, Alexander Hoffmann:
Metadata Management in the MoSGrid Science Gateway - Evaluation and the Expansion of Quantum Chemistry Support. J. Grid Comput. 15(1): 41-53 (2017) - [c17]Lukas Zimmermann, Richard Grunzke, Jens Krüger:
Maintaining a Science Gateway - Lessons Learned from MoSGrid. HICSS 2017: 1-10 - [c16]Antonio Laganà, Gábor Terstyánszky, Jens Krüger:
Open Molecular Science for the Open Science Cloud. ICCSA (3) 2017: 29-43 - [c15]Maximilian Hanussek, Felix Bartusch, Jens Krüger, Oliver Kohlbacher:
Efficient Mass Spectra Prediction through Container Orchestration with a Scientific Workflow. IWSG 2017 - [e2]Sandra Gesing, Jens Krüger:
Proceedings of the 8th International Workshop on Science Gateways, IWSG 2016, Rome, Italy, June 8-10, 2016. CEUR Workshop Proceedings 1871, CEUR-WS.org 2017 [contents] - 2016
- [j21]Sandra Gesing, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, Alexander Hoffmann:
Using Science Gateways for Bridging the Differences between Research Infrastructures. J. Grid Comput. 14(4): 545-557 (2016) - [j20]Junaid Arshad, Alexander Hoffmann, Sandra Gesing, Richard Grunzke, Jens Krüger, Tamás Kiss, Sonja Herres-Pawlis, Gábor Terstyánszky:
Multi-level meta-workflows: new concept for regularly occurring tasks in quantum chemistry. J. Cheminformatics 8(1): 58:1-58:17 (2016) - [i1]Jens Krüger, Oliver Kohlbacher:
Containerization and wrapping of a mass spectra prediction workflow. PeerJ Prepr. 4: e2528 (2016) - 2015
- [j19]Anna Katharina Hildebrandt, Daniel Stöckel, Nina M. Fischer, Luis de la Garza, Jens Krüger, Stefan Nickels, Marc Röttig, Charlotta Schärfe, Marcel Schumann, Philipp Thiel, Hans-Peter Lenhof, Oliver Kohlbacher, Andreas Hildebrandt:
ballaxy: web services for structural bioinformatics. Bioinform. 31(1): 121-122 (2015) - [j18]Sonja Herres-Pawlis, Alexander Hoffmann, Ákos Balaskó, Péter Kacsuk, Georg Birkenheuer, André Brinkmann, Luis de la Garza, Jens Krüger, Sandra Gesing, Richard Grunzke, Gábor Terstyánszky, Noam Weingarten:
Quantum chemical meta-workflows in MoSGrid. Concurr. Comput. Pract. Exp. 27(2): 344-357 (2015) - [c14]Richard Grunzke, Alvaro Aguilera, Wolfgang E. Nagel, Jens Krüger, Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing:
Managing Complexity in Distributed Data Life Cycles Enhancing Scientific Discovery. e-Science 2015: 371-380 - [c13]Sandra Gesing, Rion Dooley, Marlon E. Pierce, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, Alexander Hoffmann:
Science gateways - leveraging modeling and simulations in HPC infrastructures via increased usability. HPCS 2015: 19-26 - 2014
- [j17]Richard Grunzke, Sebastian Breuers, Sandra Gesing, Sonja Herres-Pawlis, Martin Kruse, Dirk Blunk, Luis de la Garza, Lars Packschies, Patrick Schäfer, Charlotta Schärfe, Tobias Schlemmer, Thomas Steinke, Bernd Schuller, Ralph Müller-Pfefferkorn, René Jäkel, Wolfgang E. Nagel, Malcolm P. Atkinson, Jens Krüger:
Standards-based metadata management for molecular simulations. Concurr. Comput. Pract. Exp. 26(10): 1744-1759 (2014) - [j16]Gunther Lukat, Björn Sommer, Jens Krüger:
Membrane simulation analysis using Voronoi tessellation. J. Cheminformatics 6(S-1): 23 (2014) - [c12]Sonja Herres-Pawlis, Alexander Hoffmann, Luis de la Garza, Jens Krüger, Richard Grunzke:
Expansion of Quantum Chemical Metadata for Workflows in the MoSGrid Science Gateway. IWSG 2014: 67-72 - [c11]Sonja Herres-Pawlis, Alexander Hoffmann, Luis de la Garza, Jens Krüger, Sandra Gesing, Richard Grunzke, Wolfgang E. Nagel, Gábor Terstyánszky, Noam Weingarten:
Meta-Metaworkflows for Combining Quantum Chemistry and Molecular Dynamics in the MoSGrid Science Gateway. IWSG 2014: 73-78 - [c10]Stefan Bozic, Jens Krüger, Claude Sinner, Benjamin Lutz, Alexander Schug, Ivan Kondov:
Integration of eSBMTools into the MoSGrid Portal Using the gUSE Technology. IWSG 2014: 85-90 - [p2]Sandra Gesing, Jens Krüger, Richard Grunzke, Luis de la Garza, Sonja Herres-Pawlis, Alexander Hoffmann:
Molecular Simulation Grid (MosGrid): A Science Gateway Tailored to the Molecular Simulation Community. Science Gateways for Distributed Computing Infrastructures 2014: 151-165 - [p1]Sílvia Delgado Olabarriaga, Ammar Benabdelkader, Matthan W. A. Caan, Mohammad Mahdi Jaghoori, Jens Krüger, Luis de la Garza, Christopher Mohr, Benjamin Schubert, Anatoli Danezi, Tamás Kiss:
WS-PGRADE/gUSE-Based Science Gateways in Teaching. Science Gateways for Distributed Computing Infrastructures 2014: 223-234 - 2013
- [j15]Lars Packschies, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Martin Kruse, Ulrich Lang, Ralph Müller-Pfefferkorn, Patrick Schäfer, Tobias Schlemmer, Thomas Steinke, Klaus-Dieter Warzecha, Andreas Zink:
The MoSGrid - e-science gateway: molecular simulations in a distributed computing environment. J. Cheminformatics 5(S-1): 3 (2013) - [j14]Charlotta Schärfe, Joachim Taeger, Peggy Reuter, Nina M. Fischer, Jens Krüger, Bernd Wissinger, Oliver Kohlbacher:
Development of a pharmacorphore model for pharmacological chaperones targeting mutant trafficking-deficient CNG channels. J. Cheminformatics 5(S-1): 18 (2013) - [j13]Gunther Lukat, Jens Krüger, Björn Sommer:
APL@Voro: A Voronoi-Based Membrane Analysis Tool for GROMACS Trajectories. J. Chem. Inf. Model. 53(11): 2908-2925 (2013) - [c9]Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing, Luis de la Garza, Jens Krüger, Richard Grunzke:
User-friendly metaworkflows in quantum chemistry. CLUSTER 2013: 1-3 - [c8]Luis de la Garza, Jens Krüger, Charlotta Schärfe, Marc Röttig, Stephan Aiche, Knut Reinert, Oliver Kohlbacher:
From the Desktop to the Grid: conversion of KNIME Workflows to gUSE. IWSG 2013 - [c7]Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing, Jens Krüger, Ákos Balaskó, Péter Kacsuk, Richard Grunzke, Georg Birkenheuer, Lars Packschies:
User-Friendly Workflows in Quantum Chemistry. IWSG 2013 - 2012
- [j12]Oliver Niehörster, André Brinkmann, Axel Keller, Christoph Kleineweber, Jens Krüger, Jens Simon:
Cost-Aware and SLO-Fulfilling Software as a Service. J. Grid Comput. 10(3): 553-577 (2012) - [j11]Sandra Gesing, Richard Grunzke, Jens Krüger, Georg Birkenheuer, Martin Wewior, Patrick Schäfer, Bernd Schuller, Johannes Schuster, Sonja Herres-Pawlis, Sebastian Breuers, Ákos Balaskó, Miklos Kozlovszky, Anna Szikszay Fabri, Lars Packschies, Péter Kacsuk, Dirk Blunk, Thomas Steinke, André Brinkmann, Gregor Fels, Ralph Müller-Pfefferkorn, René Jäkel, Oliver Kohlbacher:
A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics. J. Grid Comput. 10(4): 769-790 (2012) - [j10]Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Patrick Schäfer, Thomas Steinke, Klaus-Dieter Warzecha, Martin Wewior:
MoSGrid: efficient data management and a standardized data exchange format for molecular simulations in a grid environment. J. Cheminformatics 4(S-1): 21 (2012) - [j9]Sebastian Rubert, Christian Gamroth, André J. Heissmann, Gunther Lukat, Ralf Rotzoll, Alexander Schäfer, Jens Krüger, Björn Sommer:
The GMX-Plugin for the CELLmicrocosmos MembraneEditor. J. Cheminformatics 4(S-1): 49 (2012) - [c6]Sandra Gesing, Jens Krüger:
Workshop Series IWSG-Life. HealthGrid 2012: 115-118 - [c5]Sonja Herres-Pawlis, Georg Birkenheuer, André Brinkmann, Sandra Gesing, Richard Grunzke, René Jäkel, Oliver Kohlbacher, Jens Krüger, Ines dos Santos Vieira:
Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway. HealthGrid 2012: 142-151 - [e1]Sandra Gesing, Tristan Glatard, Jens Krüger, Sílvia Delgado Olabarriaga, Tony Solomonides, Jonathan C. Silverstein, Johan Montagnat, Alban Gaignard, Dagmar Krefting:
HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, Proceedings of HealthGrid 2012, Amsterdam, The Netherlands, 21-23 May 2012. Studies in Health Technology and Informatics 175, IOS Press 2012, ISBN 978-1-61499-053-6 [contents] - 2011
- [j8]Jens Krüger, Gregor Fels:
Ion permeation simulations by Gromacs - an example of high performance molecular dynamics. Concurr. Comput. Pract. Exp. 23(3): 279-291 (2011) - [j7]Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Nico Kruber, Jens Krüger, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Patrick Schäfer, Hans-Günther Schmalz, Thomas Steinke, Klaus-Dieter Warzecha, Martin Wewior:
MoSGrid - a molecular simulation grid as a new tool in computational chemistry, biology and material science. J. Cheminformatics 3(S-1): 14 (2011) - [j6]Jens Krüger, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Gregor Fels, Sandra Gesing, Richard Grunzke, Oliver Kohlbacher, Nico Kruber, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Sonja Herres-Pawlis, Patrick Schäfer, Hans-Günther Schmalz, Thomas Steinke, Klaus-Dieter Warzecha, Martin Wewior:
Molecular simulation grid. J. Cheminformatics 3(S-1): 17 (2011) - [j5]Björn Sommer, Tim Dingersen, Christian Gamroth, André J. Heissmann, Gunther Lukat, Ralf Rotzoll, Sebastian Rubert, Alexander Schäfer, Jens Krüger:
Coarse-grained and all-atom MD simulations with Gromacs based on CELLmicrocosmos 2.2 model membranes. J. Cheminformatics 3(S-1): 43 (2011) - [j4]Björn Sommer, Tim Dingersen, Christian Gamroth, Sebastian E. Schneider, Sebastian Rubert, Jens Krüger, Karl-Josef Dietz:
CELLmicrocosmos 2.2 MembraneEditor: A Modular Interactive Shape-Based Software Approach To Solve Heterogeneous Membrane Packing Problems. J. Chem. Inf. Model. 51(5): 1165-1182 (2011) - [c4]Sandra Gesing, Richard Grunzke, Ákos Balaskó, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Gregor Fels, Sonja Herres-Pawlis, Péter Kacsuk, Miklos Kozlovszky, Jens Krüger, Lars Packschies, Patrick Schäfer, Bernd Schuller, Johannes Schuster, Thomas Steinke, Anna Szikszay Fabri, Martin Wewior, Ralph Müller-Pfefferkorn, Oliver Kohlbacher:
Granular Security for a Science Gateway in Structural Bioinformatics. IWSG-Life 2011 - 2010
- [j3]Jens Krüger, Gregor Fels:
Ion permeation through neuronal nAChR ion channel. J. Cheminformatics 2(S-1): 23 (2010) - [c3]Oliver Niehörster, André Brinkmann, Gregor Fels, Jens Krüger, Jens Simon:
Enforcing SLAs in Scientific Clouds. CLUSTER 2010: 178-187 - [c2]Georg Birkenheuer, Sebastian Breuers, André Brinkmann, Dirk Blunk, Gregor Fels, Sandra Gesing, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Lars Packschies:
Grid-Workflows in Molecular Science. Software Engineering (Workshops) 2010: 177-184
2000 – 2009
- 2009
- [c1]Jens Krüger, Gregor Fels:
Potential of Mean Force of Ion Permeation through alpha7 nAChRIon Channel. IWPLS 2009 - 2008
- [j2]Jens Krüger, Wolfgang B. Fischer:
Exploring the conformational space of Vpu from HIV-1: A versatile adaptable protein. J. Comput. Chem. 29(14): 2416-2424 (2008) - 2003
- [j1]Aidong Yang, Marcus Schlüter, Birgit Bayer, Jens Krüger, Edmund Haberstroh, Wolfgang Marquardt:
A concise conceptual model for material data and its applications in process engineering. Comput. Chem. Eng. 27(4): 595-609 (2003)
Coauthor Index
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