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2020 – today
- 2024
[j1]Zhen Bi
, Siyuan Cheng, Jing Chen, Xiaozhuan Liang, Feiyu Xiong, Ningyu Zhang:
Relphormer: Relational Graph Transformer for Knowledge Graph Representations. Neurocomputing 566: 127044 (2024)- [c10]Qizhi Pei, Lijun Wu, Kaiyuan Gao, Xiaozhuan Liang, Yin Fang, Jinhua Zhu, Shufang Xie, Tao Qin, Rui Yan:
BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning. ACL (Findings) 2024: 1216-1240 - [c9]Bozhong Tian, Xiaozhuan Liang, Siyuan Cheng, Qingbin Liu, Mengru Wang, Dianbo Sui, Xi Chen, Huajun Chen, Ningyu Zhang:
To Forget or Not? Towards Practical Knowledge Unlearning for Large Language Models. EMNLP (Findings) 2024: 1524-1537 - [c8]Yin Fang, Xiaozhuan Liang, Ningyu Zhang, Kangwei Liu, Rui Huang, Zhuo Chen, Xiaohui Fan, Huajun Chen:
Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models. ICLR 2024 - [c7]Ningyu Zhang, Bozhong Tian, Siyuan Cheng, Xiaozhuan Liang, Yi Hu, Kouying Xue, Yanjie Gou, Xi Chen, Huajun Chen:
InstructEdit: Instruction-Based Knowledge Editing for Large Language Models. IJCAI 2024: 6633-6641 - [i13]Bozhong Tian, Siyuan Cheng, Xiaozhuan Liang, Ningyu Zhang, Yi Hu, Kouying Xue, Yanjie Gou, Xi Chen, Huajun Chen:
InstructEdit: Instruction-based Knowledge Editing for Large Language Models. CoRR abs/2402.16123 (2024) - [i12]Qizhi Pei, Lijun Wu, Kaiyuan Gao, Xiaozhuan Liang, Yin Fang, Jinhua Zhu, Shufang Xie, Tao Qin, Rui Yan:
BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning. CoRR abs/2402.17810 (2024) - [i11]Bozhong Tian, Xiaozhuan Liang, Siyuan Cheng, Qingbin Liu, Mengru Wang, Dianbo Sui, Xi Chen, Huajun Chen, Ningyu Zhang:
To Forget or Not? Towards Practical Knowledge Unlearning for Large Language Models. CoRR abs/2407.01920 (2024) - [i10]Liang He, Peiran Jin, Yaosen Min, Shufang Xie, Lijun Wu, Tao Qin, Xiaozhuan Liang, Kaiyuan Gao, Yuliang Jiang, Tie-Yan Liu:
SFM-Protein: Integrative Co-evolutionary Pre-training for Advanced Protein Sequence Representation. CoRR abs/2410.24022 (2024) - 2023
- [c6]Siyuan Cheng, Xiaozhuan Liang, Zhen Bi, Huajun Chen, Ningyu Zhang:
Multi-Modal Protein Knowledge Graph Construction and Applications (Student Abstract). AAAI 2023: 16190-16191 - [c5]Ningyu Zhang, Lei Li, Xiang Chen, Xiaozhuan Liang, Shumin Deng, Huajun Chen:
Multimodal Analogical Reasoning over Knowledge Graphs. ICLR 2023 - [i9]Yin Fang, Xiaozhuan Liang, Ningyu Zhang, Kangwei Liu, Rui Huang, Zhuo Chen, Xiaohui Fan, Huajun Chen:
Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models. CoRR abs/2306.08018 (2023) - 2022
- [c4]Ningyu Zhang, Mosha Chen, Zhen Bi, Xiaozhuan Liang, Lei Li, Xin Shang, Kangping Yin, Chuanqi Tan, Jian Xu, Fei Huang, Luo Si, Yuan Ni, Guotong Xie, Zhifang Sui, Baobao Chang, Hui Zong, Zheng Yuan, Linfeng Li, Jun Yan, Hongying Zan, Kunli Zhang, Buzhou Tang, Qingcai Chen:
CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark. ACL (1) 2022: 7888-7915 - [c3]Xiaozhuan Liang, Ningyu Zhang, Siyuan Cheng, Zhenru Zhang, Chuanqi Tan, Huajun Chen:
Contrastive Demonstration Tuning for Pre-trained Language Models. EMNLP (Findings) 2022: 799-811 - [c2]Ningyu Zhang, Zhen Bi, Xiaozhuan Liang, Siyuan Cheng, Haosen Hong, Shumin Deng, Qiang Zhang, Jiazhang Lian, Huajun Chen:
OntoProtein: Protein Pretraining With Gene Ontology Embedding. ICLR 2022 - [c1]Xiang Chen, Lei Li, Ningyu Zhang, Xiaozhuan Liang, Shumin Deng, Chuanqi Tan, Fei Huang, Luo Si, Huajun Chen:
Decoupling Knowledge from Memorization: Retrieval-augmented Prompt Learning. NeurIPS 2022 - [i8]Ningyu Zhang, Xin Xu, Liankuan Tao, Haiyang Yu, Hongbin Ye, Xin Xie, Xiang Chen, Zhoubo Li, Lei Li, Xiaozhuan Liang, Yunzhi Yao, Shumin Deng, Wen Zhang, Zhenru Zhang, Chuanqi Tan, Fei Huang, Guozhou Zheng, Huajun Chen:
DeepKE: A Deep Learning Based Knowledge Extraction Toolkit for Knowledge Base Population. CoRR abs/2201.03335 (2022) - [i7]Ningyu Zhang, Zhen Bi, Xiaozhuan Liang, Siyuan Cheng, Haosen Hong, Shumin Deng, Jiazhang Lian, Qiang Zhang, Huajun Chen:
OntoProtein: Protein Pretraining With Gene Ontology Embedding. CoRR abs/2201.11147 (2022) - [i6]Xiaozhuan Liang, Ningyu Zhang, Siyuan Cheng, Zhen Bi, Zhenru Zhang, Chuanqi Tan, Songfang Huang, Fei Huang, Huajun Chen:
Contrastive Demonstration Tuning for Pre-trained Language Models. CoRR abs/2204.04392 (2022) - [i5]Zhen Bi, Siyuan Cheng, Ningyu Zhang, Xiaozhuan Liang, Feiyu Xiong, Huajun Chen:
Relphormer: Relational Graph Transformer for Knowledge Graph Representation. CoRR abs/2205.10852 (2022) - [i4]Xiang Chen, Lei Li, Ningyu Zhang, Xiaozhuan Liang, Shumin Deng, Chuanqi Tan, Fei Huang, Luo Si, Huajun Chen:
Decoupling Knowledge from Memorization: Retrieval-augmented Prompt Learning. CoRR abs/2205.14704 (2022) - [i3]Siyuan Cheng, Xiaozhuan Liang, Zhen Bi, Huajun Chen, Ningyu Zhang:
Multi-modal Protein Knowledge Graph Construction and Applications. CoRR abs/2207.10080 (2022) - [i2]Ningyu Zhang, Lei Li, Xiang Chen, Xiaozhuan Liang, Shumin Deng, Huajun Chen:
Multimodal Analogical Reasoning over Knowledge Graphs. CoRR abs/2210.00312 (2022) - 2021
- [i1]Ningyu Zhang, Zhen Bi, Xiaozhuan Liang, Lei Li, Xiang Chen, Shumin Deng, Luoqiu Li, Hongbin Ye, Xin Shang, Kangping Yin, Chuanqi Tan, Jian Xu, Mosha Chen, Fei Huang, Luo Si, Yuan Ni, Guotong Xie, Zhifang Sui, Baobao Chang, Hui Zong, Zheng Yuan, Linfeng Li, Jun Yan, Hongying Zan, Kunli Zhang, Huajun Chen, Buzhou Tang, Qingcai Chen:
CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark. CoRR abs/2106.08087 (2021)
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