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James I. Lathrop
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- affiliation: Iowa State University, Department of Computer Science, Ames, IA, USA
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2020 – today
- 2024
- [j12]James I. Lathrop, Jack H. Lutz, Robyn R. Lutz, Hugh D. Potter, Matthew R. Riley:
Population-induced phase transitions and the verification of chemical reaction networks. Nat. Comput. 23(2): 347-363 (2024) - [j11]Titus H. Klinge, James I. Lathrop, Sonia Moreno, Hugh D. Potter, Narun K. Raman, Matthew R. Riley:
ALCH: An imperative language for chemical reaction network-controlled tile assembly. Nat. Comput. 23(2): 365-385 (2024) - [j10]Titus H. Klinge, James I. Lathrop, Peter-Michael Osera, Allison Rogers:
Reactamole: functional reactive molecular programming. Nat. Comput. 23(3): 477-495 (2024) - [c29]Michael C. Gerten, James I. Lathrop, Myra B. Cohen:
Traceback: A Fault Localization Technique for Molecular Programs. ISSTA 2024: 415-427 - 2023
- [c28]James I. Lathrop, Peter-Michael Osera, Addison W. Schmidt, Jesse Slater:
Verifying Chemical Reaction Networks with the Isabelle Theorem Prover. Allerton 2023: 1-8 - 2022
- [c27]Michael C. Gerten, Alexis L. Marsh, James I. Lathrop, Myra B. Cohen, Andrew S. Miner, Titus H. Klinge:
Inference and Test Generation Using Program Invariants in Chemical Reaction Networks. ICSE 2022: 1193-1205 - [c26]James I. Lathrop, Robyn R. Lutz, Cameron Brecount, Hugh D. Potter, Kathryn Rohlfing, Jesse Slater, Joshua Wallin:
SafeWalk: a Simulation Tool Kit for Exploring Software Requirements in a Safety-Critical Product Line. RE 2022: 268-269 - 2021
- [c25]Titus H. Klinge, James I. Lathrop, Peter-Michael Osera, Allison Rogers:
Reactamole: Functional Reactive Molecular Programming. DNA 2021: 10:1-10:20 - [c24]Ibrahim Mesecan, Michael C. Gerten, James I. Lathrop, Myra B. Cohen, Tomas Haddad Caldas:
CRNRepair: Automated Program Repair of Chemical Reaction Networks. GI@ICSE 2021: 23-30 - [c23]Willem Fletcher, Titus H. Klinge, James I. Lathrop, Dawn A. Nye, Matthew Rayman:
Robust Real-Time Computing with Chemical Reaction Networks. UCNC 2021: 35-50 - [i11]Willem Fletcher, Titus H. Klinge, James I. Lathrop, Dawn A. Nye, Matthew Rayman:
Robust Real-time Computing with Chemical Reaction Networks. CoRR abs/2109.02896 (2021) - 2020
- [j9]Titus H. Klinge, James I. Lathrop, Jack H. Lutz:
Robust biomolecular finite automata. Theor. Comput. Sci. 816: 114-143 (2020) - [c22]James I. Lathrop, Jack H. Lutz, Robyn R. Lutz, Hugh D. Potter, Matthew R. Riley:
Population-Induced Phase Transitions and the Verification of Chemical Reaction Networks. DNA 2020: 5:1-5:17 - [c21]Titus H. Klinge, James I. Lathrop, Sonia Moreno, Hugh D. Potter, Narun K. Raman, Matthew R. Riley:
ALCH: An Imperative Language for Chemical Reaction Network-Controlled Tile Assembly. DNA 2020: 6:1-6:22 - [c20]Michael C. Gerten, James I. Lathrop, Myra B. Cohen, Titus H. Klinge:
ChemTest: An Automated Software Testing Framework for an Emerging Paradigm. ASE 2020: 548-560 - [c19]Robyn R. Lutz, James I. Lathrop, Cameron Brecount, Kendal Gast, Kathryn Rohlfing, Joshua Wallin:
Using an Astronaut Jetpack Project to Teach Human-CPS Requirements Engineering. REET@RE 2020: 9-10 - [i10]Titus H. Klinge, James I. Lathrop:
Modulated Signals in Chemical Reaction Networks. CoRR abs/2009.06703 (2020)
2010 – 2019
- 2019
- [j8]Samuel J. Ellis, Titus H. Klinge, James I. Lathrop:
Robust chemical circuits. Biosyst. 186 (2019) - [j7]Xiang Huang, Titus H. Klinge, James I. Lathrop, Xiaoyuan Li, Jack H. Lutz:
Real-time computability of real numbers by chemical reaction networks. Nat. Comput. 18(1): 63-73 (2019) - [j6]Samuel J. Ellis, Titus H. Klinge, James I. Lathrop, Jack H. Lutz, Robyn R. Lutz, Andrew S. Miner, Hugh D. Potter:
Runtime Fault Detection in Programmed Molecular Systems. ACM Trans. Softw. Eng. Methodol. 28(2): 6:1-6:20 (2019) - [c18]Xiang Huang, Titus H. Klinge, James I. Lathrop:
Real-Time Equivalence of Chemical Reaction Networks and Analog Computers. DNA 2019: 37-53 - [i9]James I. Lathrop, Jack H. Lutz, Robyn R. Lutz, Hugh D. Potter, Matthew R. Riley:
Quorum Sensing and Verification in Chemical Reaction Networks. CoRR abs/1909.05390 (2019) - 2018
- [i8]Xiang Huang, Titus H. Klinge, James I. Lathrop, Xiaoyuan Li, Jack H. Lutz:
Real-Time Computability of Real Numbers by Chemical Reaction Networks. CoRR abs/1803.10267 (2018) - [i7]Samuel J. Ellis, Titus H. Klinge, James I. Lathrop:
Robust Chemical Circuits. CoRR abs/1808.06969 (2018) - 2017
- [c17]Samuel J. Ellis, James I. Lathrop, Robyn R. Lutz:
State logging in chemical reaction networks. NANOCOM 2017: 23:1-23:6 - [c16]Samuel J. Ellis, Titus H. Klinge, James I. Lathrop:
Robust Combinatorial Circuits in Chemical Reaction Networks. TPNC 2017: 178-189 - [c15]Xiang Huang, Titus H. Klinge, James I. Lathrop, Xiaoyuan Li, Jack H. Lutz:
Real-Time Computability of Real Numbers by Chemical Reaction Networks. UCNC 2017: 29-40 - [i6]Samuel J. Ellis, Titus H. Klinge, James I. Lathrop, Jack H. Lutz, Robyn R. Lutz, Andrew S. Miner:
Runtime Fault Detection in Programmed Molecular Systems. CoRR abs/1710.09494 (2017) - 2015
- [i5]Titus H. Klinge, James I. Lathrop, Jack H. Lutz:
Robust Biomolecular Finite Automata. CoRR abs/1505.03931 (2015) - 2014
- [c14]Samuel J. Ellis, Eric R. Henderson, Titus H. Klinge, James I. Lathrop, Jack H. Lutz, Robyn R. Lutz, Divita Mathur, Andrew S. Miner:
Automated requirements analysis for a molecular watchdog timer. ASE 2014: 767-778 - 2012
- [c13]Robyn R. Lutz, Jack H. Lutz, James I. Lathrop, Titus H. Klinge, Eric R. Henderson, Divita Mathur, Dalia Abo Sheasha:
Engineering and verifying requirements for programmable self-assembling nanomachines. ICSE 2012: 1361-1364 - [c12]Robyn R. Lutz, Jack H. Lutz, James I. Lathrop, Titus H. Klinge, Divita Mathur, Donald M. Stull, Taylor Bergquist, Eric R. Henderson:
Requirements analysis for a product family of DNA nanodevices. RE 2012: 211-220 - 2011
- [j5]James I. Lathrop, Jack H. Lutz, Matthew J. Patitz, Scott M. Summers:
Computability and Complexity in Self-assembly. Theory Comput. Syst. 48(3): 617-647 (2011) - [c11]James I. Lathrop, Jack H. Lutz, Brian Patterson:
Multi-Resolution Cellular Automata for Real Computation. CiE 2011: 181-190
2000 – 2009
- 2009
- [j4]James I. Lathrop, Jack H. Lutz, Scott M. Summers:
Strict self-assembly of discrete Sierpinski triangles. Theor. Comput. Sci. 410(4-5): 384-405 (2009) - [c10]Steven M. Kautz, James I. Lathrop:
Self-assembly of the Discrete Sierpinski Carpet and Related Fractals. DNA 2009: 78-87 - [i4]Steven M. Kautz, James I. Lathrop:
Self-assembly of the discrete Sierpinski carpet and related fractals. CoRR abs/0901.3189 (2009) - [i3]James I. Lathrop, Jack H. Lutz, Scott M. Summers:
Strict Self-Assembly of Discrete Sierpinski Triangles. CoRR abs/0903.1818 (2009) - 2008
- [c9]James I. Lathrop, Jack H. Lutz, Matthew J. Patitz, Scott M. Summers:
Computability and Complexity in Self-assembly. CiE 2008: 349-358 - [c8]Neeraj Koul, Jim Lathrop, Jack H. Lutz, Vasant G. Honavar:
Complexes of on-line self assembly. EIT 2008: 448-452 - [i2]James I. Lathrop, Jack H. Lutz, Matthew J. Patitz, Scott M. Summers:
Computability and Complexity in Self-Assembly. Electron. Colloquium Comput. Complex. TR08 (2008) - [i1]James I. Lathrop, Jack H. Lutz, Scott M. Summers:
Strict Self-Assembly of Discrete Sierpinski Triangles. Electron. Colloquium Comput. Complex. TR08 (2008) - 2007
- [c7]James I. Lathrop, Jack H. Lutz, Scott M. Summers:
Strict Self-assembly of Discrete Sierpinski Triangles. CiE 2007: 455-464 - 2004
- [j3]Jack Jie Dai, James I. Lathrop, Jack H. Lutz, Elvira Mayordomo:
Finite-state dimension. Theor. Comput. Sci. 310(1-3): 1-33 (2004) - [c6]Dan Ashlock, James I. Lathrop:
Program induction: building a wall. IEEE Congress on Evolutionary Computation 2004: 1844-1850 - 2001
- [c5]Jack Jie Dai, James I. Lathrop, Jack H. Lutz, Elvira Mayordomo:
Finite-State Dimension. ICALP 2001: 1028-1039
1990 – 1999
- 1999
- [j2]James I. Lathrop, Jack H. Lutz:
Recursive Computational Depth. Inf. Comput. 153(1): 139-172 (1999) - 1998
- [c4]Dan Ashlock, James I. Lathrop:
A Fully Characterized Test Suite for Genetic Programming. Evolutionary Programming 1998: 537-546 - 1997
- [c3]James I. Lathrop, Jack H. Lutz:
Recursive Computational Depth. ICALP 1997: 132-142 - [c2]James I. Lathrop, Martin Strauss:
A universal upper bound on the performance of the Lempel-Ziv algorithm on maliciously-constructed data. SEQUENCES 1997: 123-135 - 1994
- [j1]David W. Juedes, James I. Lathrop, Jack H. Lutz:
Computational Depth and Reducibility. Theor. Comput. Sci. 132(2): 37-70 (1994) - 1993
- [c1]David W. Juedes, James I. Lathrop, Jack H. Lutz:
Computational Depth and Reducibility (Extended Abstract). ICALP 1993: 277-288
Coauthor Index
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