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2020 – today
- 2023
[j34]Qi Yang, Zhaochun Xu
, Wenyang Zhou, Pingping Wang, Qinghua Jiang, Liran Juan:
An interpretable single-cell RNA sequencing data clustering method based on latent Dirichlet allocation. Briefings Bioinform. 24(4) (2023)- [j33]Wenyi Yang, Pingping Wang, Meng Luo, Yideng Cai, Chang Xu, Guangfu Xue, Xiyun Jin, Rui Cheng, Jinhao Que, Fenglan Pang, Yuexin Yang, Huan Nie, Qinghua Jiang, Zhigang Liu, Zhaochun Xu:
DeepCCI: a deep learning framework for identifying cell-cell interactions from single-cell RNA sequencing data. Bioinform. 39(10) (2023) - [j32]Hao Sun, Qinghua Jiang, Yi Huang, Jin Mo, Wantao Xie, Hui Dong, Yuan Jia:
Integrated smart analytics of nucleic acid amplification tests via paper microfluidics and deep learning in cloud computing. Biomed. Signal Process. Control. 83: 104721 (2023) - [j31]Shi Yan, Yao Si, Wenyang Zhou, Rui Cheng, Pingping Wang, Di Wang, Wencai Ding, Wanying Shi, Qinghua Jiang, Fan Yang, Lifen Yao:
Single-cell transcriptomics reveals the interaction between peripheral CD4+ CTLs and mesencephalic endothelial cells mediated by IFNG in Parkinson's disease. Comput. Biol. Medicine 158: 106801 (2023) - [c11]Mingqun Li, Tong Luo, Shaokai Wang, He Li, Yongjun Lei, Qinghua Jiang:
An Integrated Calibration Scheme for Attitude Benchmark of Micro-nano Satellites and Its Experiments Based on In-Orbit Data. CACRE 2023: 248-252 - [c10]Mingqun Li, Xiang Liu, Gaojian Lyu, Qinghua Jiang, Yong Wang:
Research on Satellite Attitude Control Scheme with High Precision Pointing of Astronomical Target and Its Application in Orbit. ICSCC 2023: 57-62 - 2022
- [j30]Wenyang Zhou, Chang Xu, Pingping Wang, Anastasia A. Anashkina, Qinghua Jiang:
Impact of mutations in SARS-COV-2 spike on viral infectivity and antigenicity. Briefings Bioinform. 23(1) (2022) - [j29]Rui Cheng, Zhaochun Xu, Meng Luo, Pingping Wang, Huimin Cao, Xiyun Jin, Wenyang Zhou, Lixing Xiao, Qinghua Jiang:
Identification of alternative splicing-derived cancer neoantigens for mRNA vaccine development. Briefings Bioinform. 23(2) (2022) - [j28]Qian Ding, Wenyi Yang, Meng Luo, Chang Xu, Zhaochun Xu, Fenglan Pang, Yideng Cai, Anastasia A. Anashkina, Xi Su, Na Chen, Qinghua Jiang:
CBLRR: a cauchy-based bounded constraint low-rank representation method to cluster single-cell RNA-seq data. Briefings Bioinform. 23(5) (2022) - [j27]Wenyang Zhou, Chang Xu, Meng Luo, Pingping Wang, Zhaochun Xu, Guangfu Xue, Xiyun Jin, Yan Huang, Yiqun Li, Huan Nie, Qinghua Jiang, Anastasia A. Anashkina:
MutCov: A pipeline for evaluating the effect of mutations in spike protein on infectivity and antigenicity of SARS-CoV-2. Comput. Biol. Medicine 145: 105509 (2022) - [j26]Yu Lei, Yue Meng, Xinqi Guo, Ke Ning, Yixin Bian, Lanlan Li, Zhenduo Hu, Anastasia A. Anashkina, Qinghua Jiang, Yucui Dong, Xiao Zhu:
Overview of structural variation calling: Simulation, identification, and visualization. Comput. Biol. Medicine 145: 105534 (2022) - [j25]Xiaoyu Lin, Huan Nie, Ran Tang, Pingping Wang, Xiyun Jin, Qinghua Jiang, Fang Han, Na Chen, Yu Li:
Network analysis between neuron dysfunction and neuroimmune response based on neural single-cell transcriptome of COVID-19 patients. Comput. Biol. Medicine 150: 106055 (2022) - [j24]Qinghua Jiang, Lailai Zhu, Chang Shu, Vinothkumar Sekar:
An efficient multilayer RBF neural network and its application to regression problems. Neural Comput. Appl. 34(6): 4133-4150 (2022) - 2021
- [j23]Yan Huang, Pingping Wang, Wenyang Zhou, Meng Luo, Zhaochun Xu, Rui Cheng, Chang Xu, Xiyun Jin, Yiqun Li, Qinghua Jiang:
Comprehensive analysis of partial methylation domains in colorectal cancer based on single-cell methylation profiles. Briefings Bioinform. 22(6) (2021) - [j22]Xiyun Jin, Wenyang Zhou, Meng Luo, Pingping Wang, Zhaochun Xu, Kexin Ma, Huimin Cao, Chang Xu, Yan Huang, Rui Cheng, Lixing Xiao, Xiaoyu Lin, Fenglan Pang, Yiqun Li, Huan Nie, Qinghua Jiang:
Global characterization of B cell receptor repertoire in COVID-19 patients by single-cell V(D)J sequencing. Briefings Bioinform. 22(6) (2021) - [j21]Zhaochun Xu, Meng Luo, Weizhong Lin, Guangfu Xue, Pingping Wang, Xiyun Jin, Chang Xu, Wenyang Zhou, Yideng Cai, Wenyi Yang, Huan Nie, Qinghua Jiang:
DLpTCR: an ensemble deep learning framework for predicting immunogenic peptide recognized by T cell receptor. Briefings Bioinform. 22(6) (2021) - [j20]Zhibin Lv, Pingping Wang, Quan Zou, Qinghua Jiang:
Identification of sub-Golgi protein localization by use of deep representation learning features. Bioinform. 36(24): 5600-5609 (2021) - [c9]Guofei Lv, Qinghua Jiang, Dongdong Wang:
Precision Clock Synchronization Method for Towed Line Array Sonar. ICSPCC 2021: 1-4 - 2020
- [j19]Xia-an Bi, Yingchao Liu, Yiming Xie, Xi Hu, Qinghua Jiang:
Morbigenous brain region and gene detection with a genetically evolved random neural network cluster approach in late mild cognitive impairment. Bioinform. 36(8): 2561-2568 (2020) - [j18]Renjie Tan, Jixuan Wang, Xiaoliang Wu, Liran Juan, Tianjiao Zhang, Rui Ma, Qing Zhan, Tao Wang, Shuilin Jin, Qinghua Jiang, Yadong Wang:
ERDS-Exome: A Hybrid Approach for Copy Number Variant Detection from Whole-Exome Sequencing Data. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 796-803 (2020)
2010 – 2019
- 2019
- [j17]Jiajie Peng, Weiwei Hui, Qianqian Li, Bolin Chen, Jianye Hao, Qinghua Jiang, Xuequn Shang, Zhongyu Wei:
A learning-based framework for miRNA-disease association identification using neural networks. Bioinform. 35(21): 4364-4371 (2019) - [j16]Qing Zhan, Nan Wang, Shuilin Jin, Renjie Tan, Qinghua Jiang, Yadong Wang:
ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle swarm optimization with partition function. BMC Bioinform. 20-S(18): 573:1-573:10 (2019) - [j15]Zhifa Han, Tao Wang, Rui Tian, Wenyang Zhou, Pingping Wang, Peng Ren, Jian Zong, Yang Hu, Shuilin Jin, Qinghua Jiang:
BIN1 rs744373 variant shows different association with Alzheimer's disease in Caucasian and Asian populations. BMC Bioinform. 20-S(25): 691 (2019) - [j14]Liang Cheng, Pingping Wang, Rui Tian, Song Wang, Qinghua Guo, Meng Luo, Wenyang Zhou, Guiyou Liu, Huijie Jiang, Qinghua Jiang:
LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse. Nucleic Acids Res. 47(Database-Issue): D140-D144 (2019) - 2018
- [j13]Chunyan Fan, Xiujuan Lei, Zengqiang Fang, Qinghua Jiang, Fang-Xiang Wu:
CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases. Database J. Biol. Databases Curation 2018: bay044 (2018) - [j12]Liang Cheng, Yang Hu, Jie Sun, Meng Zhou, Qinghua Jiang:
DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function. Bioinform. 34(11): 1953-1956 (2018) - [j11]Jing Xu, Linna Zhao, Di Liu, Simeng Hu, Xiuling Song, Jin Li, Hongchao Lv, Lian Duan, Mingming Zhang, Qinghua Jiang, Guiyou Liu, Shuilin Jin, Mingzhi Liao, Meng Zhang, Rennan Feng, Fanwu Kong, Liangde Xu, Yongshuai Jiang:
EWAS: epigenome-wide association study software 2.0. Bioinform. 34(15): 2657-2658 (2018) - [j10]Guiyou Liu, Shuilin Jin, Yang Hu, Qinghua Jiang:
Disease status affects the association between rs4813620 and the expression of Alzheimer's disease susceptibility gene TRIB3. Proc. Natl. Acad. Sci. USA 115(45): E10519-E10520 (2018) - [c8]Qing Zhan, Nan Wang, Shuilin Jin, Renjie Tan, Qinghua Jiang, Yadong Wang:
ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization. BIBM 2018: 1290-1295 - [c7]Zhifa Han, Tao Wang, Rui Tian, Wenyang Zhou, Pingping Wang, Peng Ren, Jian Zong, Yang Hu, Shuilin Jin, Qinghua Jiang:
BIN1 rs744373 Variant Is Significantly Associated with Alzheimer's Disease in Caucasian but Not East Asian Populations. ICIC (1) 2018: 520-526 - 2017
- [j9]Weiyang Bai, Wen Yang, Wenjing Wang, Yang Wang, Can Liu, Qinghua Jiang, Jinlian Hua, Mingzhi Liao:
GED: a manually curated comprehensive resource for epigenetic modification of gametogenesis. Briefings Bioinform. 18(1): 98-104 (2017) - [j8]Zhuo Wang, Shuilin Jin, Guiyou Liu, Xiurui Zhang, Nan Wang, Deliang Wu, Yang Hu, Chiping Zhang, Qinghua Jiang, Li Xu, Yadong Wang:
DTWscore: differential expression and cell clustering analysis for time-series single-cell RNA-seq data. BMC Bioinform. 18(1): 270:1-270:14 (2017) - 2016
- [c6]Yadong Wang, Kevin Burrage, Yunlong Liu, Shinichi Morishita, Tianhai Tian, Qinghua Jiang, Jiangning Song, Guohua Wang, Qian Zhu, Xiaohua Tony Hu:
Preface. BIBM 2016: 1-2 - [c5]Yang Hu, Meng Zhou, Hongbo Shi, Hong Ju, Qinghua Jiang, Liang Cheng:
InfDisSim: A novel method for measuring disease similarity based on information flow. BIBM 2016: 20-26 - [c4]Renjie Tan, Jixuan Wang, Xiaoliang Wu, Guoqiang Wan, Rongjie Wang, Rui Ma, Zhijie Han, Wenyang Zhou, Shuilin Jin, Qinghua Jiang, Yadong Wang:
ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data. BIBM 2016: 141-144 - [e1]Tianhai Tian, Qinghua Jiang, Yunlong Liu, Kevin Burrage, Jiangning Song, Yadong Wang, Xiaohua Hu, Shinichi Morishita, Qian Zhu, Guohua Wang:
IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016, Shenzhen, China, December 15-18, 2016. IEEE Computer Society 2016, ISBN 978-1-5090-1611-2 [contents] - 2015
- [j7]Xiao Zhu, Henry C. M. Leung, Rongjie Wang, Francis Y. L. Chin, Siu-Ming Yiu, Guangri Quan, Yajie Li, Rui Zhang, Qinghua Jiang, Bo Liu, Yucui Dong, Guohui Zhou, Yadong Wang:
misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads. BMC Bioinform. 16: 386:1-386:16 (2015) - [j6]Qinghua Jiang, Jixuan Wang, Xiaoliang Wu, Rui Ma, Tianjiao Zhang, Shuilin Jin, Zhijie Han, Renjie Tan, Jiajie Peng, Guiyou Liu, Yu Li, Yadong Wang:
LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression. Nucleic Acids Res. 43(Database-Issue): 193-196 (2015) - 2014
- [j5]Jiajie Peng, Hongxiang Li, Qinghua Jiang, Yadong Wang, Jin Chen:
An integrative approach for measuring semantic similarities using gene ontology. BMC Syst. Biol. 8(S-5): S8 (2014) - [c3]Yanjun Shen, Qinghua Jiang, Peng Miao:
Continuous but non-smooth adaptive observer of a class of nonlinear systems. ICSAI 2014: 18-22 - 2013
- [j4]Qinghua Jiang, Guohua Wang, Shuilin Jin, Yu Li, Yadong Wang:
Predicting human microRNA-disease associations based on support vector machine. Int. J. Data Min. Bioinform. 8(3): 282-293 (2013) - 2010
- [j3]Qinghua Jiang, Yangyang Hao, Guohua Wang, Liran Juan, Tianjiao Zhang, Mingxiang Teng, Yunlong Liu, Yadong Wang:
Prioritization of disease microRNAs through a human phenome-microRNAome network. BMC Syst. Biol. 4(S-1): S2 (2010) - [j2]Honglong Chang, Qiang Shen, Zhiguang Zhou, Jianbing Xie, Qinghua Jiang, Weizheng Yuan:
Design, Fabrication, and Testing of a Bulk Micromachined Inertial Measurement Unit. Sensors 10(4): 3835-3856 (2010) - [c2]Qinghua Jiang, Guohua Wang, Tianjiao Zhang, Yadong Wang:
Predicting human microRNA-disease associations based on support vector machine. BIBM 2010: 467-472 - [c1]Qinghua Jiang, Yangyang Hao, Guohua Wang, Tianjiao Zhang, Yadong Wang:
Weighted Network-Based Inference of Human MicroRNA-Disease Associations. FCST 2010: 431-435
2000 – 2009
- 2009
- [j1]Qinghua Jiang, Yadong Wang, Yangyang Hao, Liran Juan, Mingxiang Teng, Xinjun Zhang, Meimei Li, Guohua Wang, Yunlong Liu:
miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res. 37(Database-Issue): 98-104 (2009)
Coauthor Index
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