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ORCIDJean-François Gibrat
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2010 – 2019
- 2018
[j12]Jean-François Gibrat
:
A short note on dynamic programming in a band. BMC Bioinform. 19(1): 226:1-226:5 (2018)- 2017
- [c10]Mehdi Kchouk, Jean-François Gibrat, Mourad Elloumi:
An Error Correction Algorithm for NGS Data. DEXA Workshops 2017: 84-87 - 2016
- [j11]Thomas Lacroix, Sylvie Thérond, Marc Rugeri, Pierre Nicolas, Annie Gendrault, Valentin Loux, Jean-François Gibrat:
Synchronized navigation and comparative analyses across Ensembl complete bacterial genomes with INSYGHT. Bioinform. 32(7): 1083-1084 (2016) - [c9]Domenico Gallico, Matteo Biancani, Christophe Blanchet, Mohamed Bedri, Jean-François Gibrat, José-Ignacio Aznar-Baranda, Doris Hacker, Maria Kourkouli:
CYCLONE: A Multi-cloud Federation Platform for Complex Bioinformatics and Energy Applications (Short Paper). CloudNet 2016: 146-149 - [c8]Vincent Henry, Arnaud Ferré, Christine Froidevaux, Anne Goelzer, Vincent Fromion, Sarah Cohen Boulakia, Sandra Dérozier, Marc Dinh, Ghislain Fiévet, Stephan Fischer, Jean-François Gibrat, Valentin Loux, Sabine Pérès:
Représentation systémique multi-échelle des processus biologiques de la bactérie. IC 2016: 97-102 - [c7]Mathias Slawik, Begüm Ilke Zilci, Axel Küpper, Yuri Demchenko, Fatih Turkmen, Christophe Blanchet, Jean-François Gibrat:
An Economical Security Architecture for Multi-cloud Application Deployments in Federated Environments. GECON 2016: 89-101 - [c6]Yuri Demchenko, Christophe Blanchet, Charles Loomis, Robert Branchat, Mathias Slawik, Begüm Ilke Zilci, Mohamed Bedri, Jean-François Gibrat, Oleg Lodygensky, Miroslav Zivkovic, Cees de Laat:
CYCLONE: A Platform for Data Intensive Scientific Applications in Heterogeneous Multi-cloud/Multi-provider Environment. IC2E Workshops 2016: 154-159 - 2015
- [c5]Anita Burgun, Dina V. Oksen, Wolfgang Kuchinke, Hans-Ulrich Prokosch, Thomas Ganslandt, Iain E. Buchan, Tjeerd Pieter van Staa, James A. Cunningham, Marianne L. Gjerstorff, Jean-Charles Dufour, Jean-François Gibrat, Macha Nikolski, Pierre Verger, Anne Cambon-Thomsen, Cristina Masella, Emanuele Lettieri, Paolo Bertele, Marjut Salokannel, Rodolphe Thiébaut, Charles Persoz, Geneviève Chêne, Christian Ohmann:
Proposal for a European Public Health Research Infrastructure for Sharing of health and Medical administrative data (PHRIMA). MedInfo 2015: 1005 - 2012
- [j10]Franck Samson, Richard Shrager, Chin-Hsien Tai, Vichetra Sam, Byungkook Lee, Peter J. Munson, Jean-François Gibrat, Jean Garnier:
DOMIRE: a web server for identifying structural domains and their neighbors in proteins. Bioinform. 28(7): 1040-1041 (2012) - [j9]Afshin Fayyaz Movaghar, Guillaume Launay, Sophie Schbath, Jean-François Gibrat, François Rodolphe:
Statistical Significance of Threading Scores. J. Comput. Biol. 19(1): 13-29 (2012) - [j8]Sophie Schbath, Véronique Martin, Matthias Zytnicki, Julien Fayolle, Valentin Loux, Jean-François Gibrat:
Mapping Reads on a Genomic Sequence: An Algorithmic Overview and a Practical Comparative Analysis. J. Comput. Biol. 19(6): 796-813 (2012) - 2011
- [j7]Guillaume Collet, Rumen Andonov, Nicola Yanev, Jean-François Gibrat:
Local protein threading by Mixed Integer Programming. Discret. Appl. Math. 159(16): 1707-1716 (2011) - 2010
- [j6]Karel Zimmermann, Jean-François Gibrat:
Amino acid "little Big Bang": Representing amino acid substitution matrices as dot products of Euclidian vectors. BMC Bioinform. 11: 4 (2010)
2000 – 2009
- 2009
- [c4]Guillaume Collet, Rumen Andonov, Nicola Yanev, Jean-François Gibrat:
Protein Threading. CTW 2009: 341-344 - [c3]Bastien Rance, Jean-François Gibrat, Christine Froidevaux:
An Adaptive Combination of Matchers: Application to the Mapping of Biological Ontologies for Genome Annotation. DILS 2009: 113-126 - 2008
- [j5]Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-François Gibrat, Byungkook Lee, Peter J. Munson:
Towards an automatic classification of protein structural domains based on structural similarity. BMC Bioinform. 9 (2008) - [j4]Jean-François Taly, Antoine Marin, Jean-François Gibrat:
Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models? BMC Bioinform. 9 (2008) - [c2]Lucie Gentils, Jérôme Azé, Claire Toffano-Nioche, Valentin Loux, Anne Poupon, Jean-François Gibrat, Christine Froidevaux:
Mesures Hiérarchiques pondérées pour l'évaluation d'un système semi-automatique d'annotation de génomes utilisant des arbres de décision. EGC 2008: 133-138 - 2007
- [p1]Rumen Andonov, Guillaume Collet, Jean-François Gibrat, Antoine Marin, Vincent Poirriez, Nicola Yanev:
Recent Advances in Solving the Protein Threading Problem. Grid Computing for Bioinformatics and Computational Biology 2007: 325-356 - [i1]Rumen Andonov, Guillaume Collet, Jean-François Gibrat, Antoine Marin, Vincent Poirriez, Nicola Yanev:
Recent Advances in Solving the Protein Threading Problem. CoRR abs/0707.3750 (2007) - 2006
- [j3]Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-François Gibrat, Byungkook Lee, Peter J. Munson:
ROC and confusion analysis of structure comparison methods identify the main causes of divergence from manual protein classification. BMC Bioinform. 7: 206 (2006) - 2005
- [j2]Juliette Martin, Jean-François Gibrat, François Rodolphe:
Choosing the Optimal Hidden Markov Model for Secondary-Structure Prediction. IEEE Intell. Syst. 20(6): 19-25 (2005) - [c1]Vincent Poirriez, Rumen Andonov, Antoine Marin, Jean-François Gibrat:
FROST: Revisited and Distributed. IPDPS 2005
1990 – 1999
- 1994
- [j1]Jean-François Gibrat, Jean Garnier, Nobuhiro Go:
Normal Mode Analysis of Oligomeric Proteins: Reduction of the Memory Requirement by Consideration of Rigid Geomertry and Molecular Symmetry. J. Comput. Chem. 15(8): 820-837 (1994)
Coauthor Index
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