Analysis of Expression and Functions of Histone Deacetylase 6 (HDAC6)

Methods Mol Biol. 2016:1436:85-94. doi: 10.1007/978-1-4939-3667-0_6.

Abstract

Histone deacetylase 6 (HDAC6) is a member of class IIb HDAC family. HDAC6 exists predominantly in the cytoplasm and deacetylates mainly non-histone proteins in the cytoplasm. Via its deacetylase and ubiquitin binding domains, HDAC6 regulates microtubules, cytoskeleton, intracellular trafficking, and cellular responses to stress. HDAC6 plays a central role in physiology and pathobiology in various organs and tissues. Herein we describe the methods for analysis of expression and function of HDAC6 in diverse physiological and pathological contexts.

Keywords: Acetylation; Chaperone; Histone deacetylase 6; Stress; Ubiquitin.

MeSH terms

  • Cell Line
  • Gene Expression*
  • Gene Knockdown Techniques
  • Histone Deacetylase 6 / chemistry
  • Histone Deacetylase 6 / genetics*
  • Histone Deacetylase 6 / metabolism*
  • Histone Deacetylases / metabolism
  • Humans
  • Immunoprecipitation
  • Protein Binding
  • Protein Domains
  • Ubiquitin / metabolism

Substances

  • Ubiquitin
  • HDAC6 protein, human
  • Histone Deacetylase 6
  • Histone Deacetylases