Zingiber officinale (ginger): 122056536
Help
Entry
122056536 CDS
T08725
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122056536
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122056536
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122056536
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122056536
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122056536
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122056536
Prokaryotic type
122056536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
122056536
NCBI-ProteinID:
XP_042474467
LinkDB
All DBs
Position
3B:complement(65020094..65042898)
Genome browser
AA seq
673 aa
AA seq
DB search
MAAVSSPLIHSCLRSHSPRLASLFLPSTLLRRPPHHFKSLPTGSCRRLAVASSFTSSAVE
SDPRLAVGPAVEVSDGTSEVKKEEDLVEQRIILPTNESSEKLLRIRHTCAHVMAMAVQRL
FPGSKVAIGPWIDNGFYYDFDMEPLADRDLKRIKKEMDRIISRNLPLIKEEVSREEAKIR
IMALNEPYKLEILESIKEEPITIYHIGNEWWDLCAGPHVDSTGHIDKMAIELESVAGAYW
RGDENKPMLQRIYGTAWETEEHLKAFLYLKEEAKRRDHRRLGQDLDLFSIQEDAGGGLVF
WHPKGAIMRHLIEDTWKKIHLDHGYELLYTPHVAKVDLWKISGHLEFYRENMYDQMNIED
ELYQLRPMNCPYHILVYKRKLQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDA
HIFCLDDQIKHEIRGVLDLTEKILLQFGFRKYEVNLSTRPEKSVGSDDIWEKATSALRDA
LDDKGWHYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDMSYVDSNAEK
RRPIMIHRAALGSLERFFGVLIEHYAGDFPLWIAPIQARILPVTDTEVQYCTEIVSKLSS
TGIRAEICHGERLPKLIRNAEKQKVPLMAVIGPREVETHTVTIRSRFGGELGTMTIDEFI
SRIKSAAEKRRFL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtctcctcgcctctcatccactcttgcctccgatcccattctcctcgtctc
gccagtttgttccttccctcgactctactacggaggcctcctcaccacttcaaatctttg
ccgaccggtagttgccgcagactcgccgttgcatcctcttttacctcctccgcagtggaa
tcggatcctcgtctggcagtcggtccggcagtcgaggtgagcgatgggacctccgaggtc
aaaaaagaggaagatttagtggagcaaaggatcatccttccaactaatgagtcatccgag
aaactactccggattcgccacacgtgtgcacatgttatggcgatggctgttcagaggctc
ttccctggttctaaagtggccataggtccgtggatagataatggcttttattatgatttt
gatatggagcctttggcggatagagacctaaagagaataaagaaggaaatggatcgaatt
attagtcggaatctgccgttaataaaagaagaagtctccagagaagaggccaagatacgg
attatggctcttaatgagccttataagttggaaatattggaaagtataaaggaagagcct
attacgatttatcatataggaaacgaatggtgggatctttgtgctggaccccatgtggac
tcaactggacatatagacaaaatggctattgaactggaatctgttgctggagcctactgg
cgaggtgatgagaataaacccatgttgcaaaggatatatggaacagcatgggagactgaa
gaacatttaaaagctttcctttatttaaaggaagaggcaaagcgacgtgatcataggcgt
cttggtcaggatctcgatctgttctctatacaggaagatgcaggtggagggttggtgttt
tggcatccaaaaggtgccatcatgaggcaccttattgaagatacatggaaaaaaattcac
ctggaccatggttatgagctactttacactccccatgttgccaaggttgatctatggaaa
atcagtggccacttggaattttacagagaaaatatgtatgatcagatgaacatagaagat
gaactctatcaacttaggccaatgaattgtccttaccacatattggtttacaaaaggaaa
ctgcaatcatacagggatcttcccatcagagttgctgagttgggaacagtataccgatac
gaattgtctggtagcttgcatggactgtttcgggtgcgagggtttactcaggatgatgca
cacattttctgtttggatgaccaaattaaacatgagatcaggggtgttcttgatttaaca
gagaagatattgcttcaatttggttttagaaagtatgaagttaatctttcaacccggcca
gagaaatctgttggcagcgatgatatatgggaaaaagcaacttctgccttaagagatgct
ctcgatgacaaaggttggcattatcagattgatgaaggtggtggtgctttctatggtcca
aaaattgatctaaagattgaagatgctcttggaaggaaatggcaatgctcaacagtgcag
gttgatttcaatctgccagagcggtttgacatgtcatatgttgactccaatgctgaaaag
agacgtcctattatgatccacagagctgcgcttgggtccctcgagagattttttggtgtc
cttatagagcattatgctggcgactttccactatggattgctccgatccaagctcggatt
ttacctgtaactgatactgaggtccagtactgcactgagattgtctcaaaactcagttct
acaggcattcgagctgagatatgccatggtgagcgcctaccgaaactcataaggaatgca
gaaaaacagaaagtgcctttgatggctgttattgggccaagagaagtcgagactcacaca
gtaactattaggtcaaggtttggaggtgaactaggaaccatgacgattgacgagttcatc
agtagaatcaagtcggcagcggaaaaaagaagattcttataa
DBGET
integrated database retrieval system
