Selaginella moellendorffii: SELMODRAFT_130418
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Entry
SELMODRAFT_130418 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SELMODRAFT_130418
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smo01007
]
SELMODRAFT_130418
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_130418
Enzymes [BR:
smo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
SELMODRAFT_130418
Amino acid related enzymes [BR:
smo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SELMODRAFT_130418
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SELMODRAFT_130418
Prokaryotic type
SELMODRAFT_130418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
9638087
NCBI-ProteinID:
XP_002989765
JGI:
130418
UniProt:
D8T2D2
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MADPAVIQKRIRIFSELQASERARNEKLGGQPIDVTVHKDGEVVYPGRRLLTTPLDIARL
ISKKKAADYVIAQVNGTLWDMGRPLEEDCTLVLYAFKDEQGRDTFWHSSAHILGESLEQA
YGCKLCIGPCTTRGEGFYYDAFYEDGRTLNEENFPAVQSQVTKAVQESQPFERIQVTRQQ
ALEIFSDNQFKVEIINDLPEDAVITVYRCGPLVDLCRGPHIPNTSYVKAFSCLKASACYW
KGKQERESLQRVYGISYPDNQSLKAYMTKYEEAKKRDHRLLGKNQQLFFFHELSPGSAFF
LPKGTIVYNKLLQFIRSEYRKRGFDEVVTPNIYNMKLWEQSGHAAHYKENMFVFEIEKQE
FGLKPMNCPGHCLLFQHRVRSYRELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHI
FCMESQVYDEVKGCLDFLDYVYTIFGFTYDLKLSTRPENFLGESSLWDRAEGALADALNA
HAKPWQMNEGDGAFYGPKIDIQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIER
PVIIHRAILGSIERMFAILLEDNAGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAG
FEVDVDVSDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEVRTKAACL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggcggtgatccagaagcgcattcgcatcttcagcgagctacaggcgtcg
gagcgcgcgcgcaacgagaagctcggaggccagccgatcgatgtgactgtgcacaaggat
ggggaagtggtgtaccccggaagaaggcttctcacgactccactggacattgccaggcta
atctcgaagaagaaggctgctgattatgttattgcgcaggtgaatggaactctgtgggat
atgggacgccctttggaagaggattgcacgcttgttctttacgcgtttaaggacgagcag
ggtcgtgatactttctggcactcgagtgctcatatccttggcgagtctttagaacaagcg
tatggttgcaagctctgcattggtccctgcacgacaaggggagagggtttttactatgat
gctttttacgaagacgggagaacactcaacgaagagaacttcccggctgtgcaaagccaa
gtgacgaaagccgttcaggagagtcagccgtttgaacggatacaagtgacacggcaacag
gctctggagattttttctgataaccagttcaaagtagaaataattaatgatttgcccgag
gatgctgtgataacagtttacagatgcggtccacttgttgatttgtgtcgtggacctcat
attcccaacacatcctatgtgaaagctttttcttgcttgaaggcctccgcgtgctattgg
aaaggtaagcaagaacgggaaagccttcaacgcgtttacggaatatcatatcctgataat
cagtccctgaaggcttatatgaccaagtatgaagaagccaagaaacgggaccatcggtta
cttgggaaaaaccagcagctctttttcttccacgaattgagcccagggagtgcattcttt
cttccaaagggcacgattgtgtacaacaaactgttgcaatttatccgttcagaatacagg
aagcgaggttttgacgaggtagtcactccgaacatttataacatgaaactttgggaacaa
tccggacatgcggctcattataaagaaaacatgttcgtcttcgagatagaaaagcaagaa
tttggtctgaagcccatgaattgtcccggccattgtttacttttccaacacagggtccgt
tcatatcgagagctgcctctgagaatagctgattttggggttttacaccgaaacgaatta
agtggtgcactcacggggctgacacgagtcaggcgtttctcacaggatgatgctcatatc
ttttgcatggaatctcaagtttatgatgaagtcaagggatgtctggactttctcgattac
gtgtacaccattttcggctttacttatgatctcaaattgtccacgcggccagaaaacttt
cttggcgagagctccttgtgggatcgggcggaaggggcattggcggacgctctgaatgcg
catgcaaagccctggcagatgaacgaaggagatggtgctttttacgggcctaagattgac
atccaagtatctgatgcactcaacagaaagttccagtgcgcaacaattcagcttgacttc
caatcaccgattcggttcaagctgagctactcggccgaagacgaagcaaagatcgagcgg
cctgtcatcatacaccgggcgatattggggtccattgaacggatgttcgcaatactgttg
gaagacaatgctggaaaatggcccttctggctcagcccgcgccaagctatcgttctcaca
atctcggagaagtttaaagactacgccgaggaggttcgtgccaaacttcacgctgctggt
ttcgaggtagacgtcgatgtctcggacagaaaggtggacaagaaggtccgagaagctcaa
atggcacactacaactatctcttggtggtgggcgctatggagcaagagaaaggagaagta
agaacgaaagcagcgtgtctttaa
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