Shewanella japonica: SJ2017_2026
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Entry
SJ2017_2026 CDS
T04959
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sja
Shewanella japonica
Pathway
sja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJ2017_2026
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sja01007
]
SJ2017_2026
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_2026
Enzymes [BR:
sja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
SJ2017_2026
Amino acid related enzymes [BR:
sja01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SJ2017_2026
Transfer RNA biogenesis [BR:
sja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SJ2017_2026
Prokaryotic type
SJ2017_2026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
MCM_WH_arc
Motif
Other DBs
NCBI-ProteinID:
ARD22324
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All DBs
Position
2426526..2428454
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AA seq
642 aa
AA seq
DB search
MPIITLPDGSKREFADSVSTLDVAADIGPGLAKACIAGRVNGELVDACDLITTDSELSII
TAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLDHKLTQEDIDAL
EKRMLALAKTNYSVVKKVVSWQEARDTFESRGEEYKIAILDENISKDSTPALYHHEEYTD
MCRGPHVPNMKFCHHFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLYLELEKFIRQKLGQYTYQEVKGPLMMD
RNLWERSGHWDKYADAMFTTNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLKMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHVFCTDEQVQEQVSECIQMVYDTYGSFGFNNIVVKL
STRPEKRIGDDDMWDRAEEALKQALDANNIEFEVLPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPARLGATYVAEDNTRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPV
QVIVMNITDKQSDYVDEIVKTFKESGIRASKDLRNEKIGFKIREHTLKRVPYLLVVGDQE
MENKEVAVRTRDGIDLGKMKINDFAAKIQEQISSRSLLLLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctattattacattgcctgatggcagcaaacgcgagtttgcagattctgtatcaaca
ttagatgtcgcagccgacattggtcctggtttagctaaagcttgtattgctggccgcgtt
aatggcgagctagtagacgcttgcgacttgatcacaacagactcagaattgtctatcatt
acggctaaagacgaagaaggtgttgaaattcttcgccattcttgtgcgcatttattaggg
catgctattaagcaaatgtggcctgaaaccaaaatggcgattggtcctgttatcgataac
ggtttttactacgacatcgatttagaccacaagctaacgcaagaagatattgatgcgctt
gaaaagcgtatgttggcattagcaaaaacaaattatagtgttgttaagaaagttgtttct
tggcaagaagctcgtgacacttttgagtcacgtggcgaagaatacaaaattgcaattctt
gatgaaaatattagcaaggattcaacacctgctttatatcaccatgaagaatatactgac
atgtgtcgtggtccgcatgtgccaaacatgaaattctgtcatcactttaaactaatgagt
gttgcaggtgcatactggcgcggtaactctgataacaagatgttgcagcgtgtttatggt
acagcttgggcagacaaaaaagcattaaaagtgcatttgaaccgtcttgaagaagcggca
aaacgtgatcaccgtaaaattggtaagcaacttgatctataccatatgcaagaagaagca
ccaggtatggtgttctggcataacgacggttggagtttatatttagagcttgagaagttt
attcgtcaaaagctaggccaatatacttaccaagaagttaaaggtccgttgatgatggat
cgtaacttatgggaacgttcaggccactgggacaaatatgctgacgcgatgtttaccaca
aacagtgaaaatcgtgagtatgcgattaaaccaatgaactgtcctggtcacgttcaaatc
tttaatcaaggactaaaatcttaccgcgacttaccattgaaaatggctgagtttggttgt
tgtcatcgtaatgaaccatctggttcacttcacggcttaatgcgcgtacgtggctttacc
caagatgatgcgcatgttttctgtactgatgagcaagttcaagagcaggtaagtgaatgt
atccaaatggtttacgatacttatggcagctttggcttcaacaatatcgttgttaaatta
tcgacacgcccagaaaagcgtatcggtgatgatgatatgtgggatagagcagaagaggca
cttaagcaagctttagatgcaaataacattgaatttgaagtgttaccaggtgaaggtgca
ttctacggcccgaaaatcgaatttacattacatgactgcttagaccgtgcttggcaatgt
ggtacagtgcaattagattacgcattaccagcgcgtcttggtgcaacttacgttgctgaa
gataacactcgccagacaccagttatgatccatagagctattttagggtctcttgaacgt
ttcttaggtattcttattgaagaatatgcaggtaaattcccaacatggcttgcacctgtg
caagtaattgttatgaatattactgataaacagtctgattatgttgacgaaattgttaaa
actttcaaagaaagtggcattcgtgcatctaaagacttgaggaatgagaaaataggcttt
aaaatacgtgaacatacgcttaagcgtgtaccttatttattggtcgtaggcgatcaagaa
atggaaaataaggaagttgcggtaagaacacgtgacggtatcgatttaggtaagatgaaa
atcaatgatttcgctgccaagatacaagaacaaatttctagccgtagtctattattgttg
gaggaatag
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