Shewanella sp. WE21: CKQ84_19945
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Entry
CKQ84_19945 CDS
T05404
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CKQ84_19945
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shew01007
]
CKQ84_19945
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_19945
Enzymes [BR:
shew01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
CKQ84_19945
Amino acid related enzymes [BR:
shew01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CKQ84_19945
Transfer RNA biogenesis [BR:
shew03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CKQ84_19945
Prokaryotic type
CKQ84_19945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
MCM_WH_arc
Motif
Other DBs
NCBI-ProteinID:
AVI67915
LinkDB
All DBs
Position
complement(4467351..4469279)
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AA seq
642 aa
AA seq
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MPVITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSII
TAKDEDGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIDAL
EKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEDYKIAILDENISKDATPALYHHEEYTD
MCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMD
RVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYATFGFENIVVKL
STRPEKRIGDDAMWDRAEEALKQALRANNIEFTILPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPM
QVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQE
MENKEVAVRTRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaattacacttcccgatggtagcaaacgcgagtttgcccatgctgtatcgacc
ctcgatgttgccgccgatattggccctggtttagcgaaagcttgtatcgctggccgcgtt
aatggcgaattaaaagatgcttgcgatctcattgaaaccgatgctgagctatcaatcatt
accgccaaagacgaagacggtgttgaaattcttcgccattcttgcgcgcatttattaggt
cacgcgattaagcaaatgtggccagaaaccaagatggcgattggtcctgttatcgataat
ggcttctactatgatatcgaccttgagcacaagttgactcaagatgacatcgacgcctta
gaaaagcgcatgcttcaactggcaaaaaccaactatgacgtagtaaaacgtgtcgttagc
tggcaagaagcccgtgatacattcgctgcgcgcggtgaagattataagattgccattctg
gatgagaacatcagcaaagacgcgacgcctgcgctatatcatcacgaagaatacactgac
atgtgtcgtggaccgcacgtacctaacatgcgtttctgccaacattttaaattaatgagc
attgccggcgcttattggcgtggcaactcagaaaacaagatgttgcaacgtatctatggt
accgcttgggccgacaaaaaagccctgagtacgcacttaacccgtcttgaagaagcggct
aagcgtgaccaccgtaaaatcggtaagcagctcgacttgtatcacatgcaagaagaagca
ccgggtatggtgttttggcataacgacggttggagcattttcctcgaattagaaagattc
attcgccgtaagctaaaccaatacacttaccaagaagtgaaaggtccattaatgatggac
cgcgtgttgtgggaacgttctggtcactgggataaatactcagaagccatgttcacgacc
agcagcgaaaaccgcgaatacgctatcaagccaatgaactgccctggccacgtgcagatc
ttcaaccaagggttgaaatcttaccgtgatctaccattgcgtatggcggaatttggttgc
tgtcaccgtaatgaaccttcaggctcgttacatggattaatgcgtgtacgtggttttacg
caagacgacgcccatattttctgtactgacagccaagttcaagaagaagtgagtgcctgt
atccagatggtttacgatacttacgccaccttcggctttgaaaatatcgtagtaaaactg
tctactcgcccagagaaacgtatcggtgacgatgcaatgtgggacagagcagaagaagca
cttaagcaagctctgcgtgccaataatattgaattcactattttgccaggcgaaggcgcg
ttctacggacccaaaatcgaatttactttacacgattgtttggaccgagcgtggcaatgt
ggtactgtgcagctcgattatgcgttgccaagccgtcttggtgcaacttacgttgccgaa
gataacagccgtcagaccccagtgatgatccatcgtgctattttaggctctttggaacga
ttcttgggtatcttgatagaagaatatgcaggacgtttcccaacttggttagccccaatg
caagttgtcgtgatgaatatcaccgataaacaggctgattatgttgaagaagtcgtaaaa
ttcttcaaagaacaaggtattcgagcgtcttttgacttgaggaatgagaaaataggcttt
aaaatacgcgagcacaccttaaggcgtgtcccttatttgttggtcgttggcgatcaagaa
atggaaaataaggaagtagcggtgcgtacccgtgatggtatcgatttaggtaagatgcga
cttgaagatttcgccactaaaatccatcaacagatttcgctccgtagtctcaaattgttg
gaggaatag
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