Sedimentibacter sp. zth1: JYG23_02660
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Entry
JYG23_02660 CDS
T07110
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYG23_02660 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sedz01007
]
JYG23_02660 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_02660 (thrS)
Enzymes [BR:
sedz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
JYG23_02660 (thrS)
Amino acid related enzymes [BR:
sedz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JYG23_02660 (thrS)
Transfer RNA biogenesis [BR:
sedz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYG23_02660 (thrS)
Prokaryotic type
JYG23_02660 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
DUF5064
tRNA-synt_2
LsmAD
Motif
Other DBs
NCBI-ProteinID:
QSX06380
UniProt:
A0A974XD43
LinkDB
All DBs
Position
556276..558198
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AA seq
640 aa
AA seq
DB search
MIKLTMPDGSVREYEKGTKAIDVAKSISEGLARVILAASYNNKTIDLQQELQEDGTIKFL
KFEDEDGKHAFWHTSSHILAQAIKRIWPEAKLAIGPSIKDGFYYDIDLDYRIVEEDLEKI
QAEMKKIVKENIKLERFELPRDEALKFMSDNKEPYKVELINDLPEDSIISFYKQGEFTDL
CAGPHIESTKKVKAIKLLSIAGAYWRGSEKNKMLQRIYGITFDKAKNLEEHLNMLEEAKK
RDHRKLGKELGLFFMSEEGPGFPFFLPKGVEVKNELVKFWREVHKEAGYVEVETPIILNK
HLWETSGHWSHYKENMYTTMIDDEDYAIKPMNCPGGMLVYKNSPHSYKDFPIRVGELGRV
HRHELSGALHGLMRVRTFTQDDAHIFMLPNQIKDEIKNVANLIDRIYKTFGFSYSVELST
RPEDFLGDIKDWDIAENALESALKELGLDYKINEGDGAFYGPKIDFKIRDCIGREWQCGT
IQLDYQLPQRFELEYIGADGQKHRPIMIHRVALGSLERFFGVLIEQYAGAFPTWIAPVQV
KILPISDKFNDYAMSVKKDLEAKGIKVVLDDRSEKIGYKIREAQLEKTPYMFVVGEKEKE
SNTVAVRERSKGDIGSMSIDEIASTIINKIVNRENDSPQV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattaacaatgcctgatggcagtgttcgagagtacgaaaaaggaactaaagct
attgatgtagcaaaaagtataagtgaaggattagcaagagtaattctagctgcaagctat
aataataaaacgatagatttacaacaagaattacaagaggatggaacaattaagttcttg
aaatttgaagacgaagatggaaaacatgcattttggcatacttcatcacatatattggcg
caagctataaaaagaatatggccagaagcaaaacttgctataggtccttcaattaaagat
ggattttactatgatattgatttagattatagaatagtagaagaagatttagaaaaaatt
caagctgaaatgaaaaaaatagtaaaagaaaatattaagcttgaaagatttgaattacca
agagatgaagcgttgaagtttatgtcagataataaagaaccttataaagttgagttgatt
aatgacttgcctgaggattcgattatttctttctataaacaaggagaatttactgacctt
tgtgctggtcctcatattgaatcaacaaaaaaagtaaaagcaataaagttattaagtatc
gctggagcttattggagaggtagcgagaaaaataaaatgcttcagagaatttatggtata
acttttgacaaagcaaaaaatttagaagaacatttaaacatgttagaggaagctaaaaaa
agagaccatagaaaacttggaaaagaattaggattgttctttatgtctgaagaaggacct
ggatttccatttttcttgccaaaaggtgtagaagttaaaaatgagttagttaaattttgg
agagaagtacacaaggaagctggatatgttgaagttgagactcctattatcttgaataaa
catttatgggaaacttcaggacactggtcccactataaagaaaatatgtatactactatg
atagatgatgaagattatgcaattaaaccaatgaactgtccaggtggaatgttagtttat
aaaaattcacctcattcatacaaggatttccctattagagtaggcgagttaggtagagtt
catagacatgagttgtctggtgctttacatggtcttatgagagtaagaacatttacacaa
gatgatgcacatatatttatgttgcctaatcaaataaaagatgaaattaaaaatgttgca
aatttaattgatagaatatataaaacttttggatttagttatagtgttgagttatctact
agaccagaagatttcttaggagatattaaagattgggatatagctgagaatgcacttgaa
tctgcacttaaagaattaggcttagattataaaataaatgaaggtgatggtgctttctat
ggtcctaaaatagactttaagataagagattgcataggcagagaatggcaatgtggaact
attcagttagattaccagttaccacaaagatttgaacttgagtatattggagctgatggg
caaaaacatagaccaataatgattcatagggttgcacttggtagtctagaaagatttttt
ggagttttaattgagcaatatgctggagcttttccaacatggatagcaccagtacaagtt
aaaatattacctatttcagataaatttaatgattatgctatgtctgttaaaaaagattta
gaagcaaaaggtataaaagtagtcttagatgatagatctgaaaaaataggttataaaatt
agagaagcacagcttgaaaaaacaccttatatgtttgttgttggagaaaaagaaaaagaa
tctaacactgttgctgtaagagaaagaagcaaaggtgatataggttcaatgtcaattgat
gaaattgcttcaactataattaataagatagtaaatagagaaaatgattcaccacaagta
tag
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