Polypterus senegalus (gray bichir): 120538107
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Entry
120538107 CDS
T08668
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120538107
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psex01007
]
120538107
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120538107
Enzymes [BR:
psex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120538107
Amino acid related enzymes [BR:
psex01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120538107
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120538107
Prokaryotic type
120538107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
120538107
NCBI-ProteinID:
XP_039623474
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All DBs
Position
1:complement(203471253..203558199)
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AA seq
697 aa
AA seq
DB search
MWWATLKRLRAIGGPCIRPYCKAVTSSFLTERLERFEQLKEKYCKQLLERGEFNCRPIWI
SLPDGKKVEGMSWKTSPLDLVTQFRPSLAKTALVASVNGELWDLTRPLEDNGELQVFDFD
STVGKAVLWHSSAHVLGCAMEQFYGGSLCHGPNTENGFFYDMYLDKGSVCSSDLHSLEEL
CLQIINRKHFFERVQVPREELCKLFKHNRFKLHYIEEKIREPSATVYRCGTLVDLCHGPH
IPHTGKLKAFKLVKNSSVYWQGNPKKETLHRVYGISFPSVRQLKDYENEQQEAKKRDHRK
IGKDQELYFFHEMSPGSCFFLPKGAHIYNTLIDFIKSEYRQRGFTEVVTPNIYSTKLWER
SGHWEHYSSNMFSFQVEEETYALKPMNCPGHCLMYEHRPRSWRELPLRLADFGVLHRNEL
SGTLTGLTRVRRFAQDDAHIFCTMEQLEKEIKDCLDFLQAVYSVFGFTFRLFLSTRPDEF
LGDVKVWEEAEKQLEQSLQEFGEPWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDF
QLPIRFDLNYVSKGGELQRPVMIHRAILGSVERMIAVLAENYAGKWPLWLSPNQVMIIPV
GVSAEQYAQEVWQLFHDTGFMVDIDTDTGVTFNKKIRNAQLSQYNFILVVGDQEQMKGTV
NVRTRTGKQHGEFLVGEAIQRISRLRDMKVKNAEEEF
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgggcaacgttaaagagattacgggcgatcggtggtccctgtatccgaccgtat
tgcaaggcagtgacctcttcatttctcactgagagattagaacgttttgaacagctcaaa
gaaaagtattgcaaacaactgttggaaagaggagagttcaattgtcgtcccatttggatc
tcccttcctgatggaaagaaagtggagggcatgtcatggaagacaagtcccttagatttg
gtgactcagttcagacctagccttgcaaaaactgctttggttgccagtgtaaacggagaa
ttgtgggacttgacaagacctctagaagacaatggagaattgcaggtgtttgattttgac
agtacagtggggaaagcggtgttgtggcactccagtgcacatgttcttggttgtgccatg
gaacagttctatggaggatcactctgccatggtccaaacactgaaaatggttttttttat
gacatgtatttggataaaggttcagtatgcagcagtgatcttcattctttggaggagtta
tgtcttcagattattaataggaaacacttttttgaaagagtgcaagtccctcgggaggaa
ctgtgtaagctgtttaagcataacagatttaagttgcattatattgaggaaaagattaga
gagccatctgccacagtgtacaggtgtggaactcttgtagatctttgtcatggcccgcac
attcctcatacaggcaaattaaaggcattcaaattggttaagaactcatctgtgtactgg
caaggaaatcctaaaaaggaaacccttcaccgtgtgtatggaatttcattcccaagcgtt
aggcaactgaaagactatgaaaatgagcaacaggaggcaaaaaaacgggatcatcgtaaa
attggcaaggaccaggaactgtatttttttcatgaaatgagtcctggcagctgcttcttt
ctacctaaaggagcccacatatacaacacactaattgattttataaagagtgaatatcga
cagcgaggttttactgaagttgtgactccaaacatctatagtacgaagctctgggaacgc
tctggccattgggagcactacagcagcaacatgttttcattccaagtagaggaagagacc
tatgctctaaaacccatgaactgtccagggcattgcctgatgtatgagcatagacctcgt
tcttggcgtgaattacctttgcgattggcagattttggtgttctccatcgcaatgaactt
tctggcactttaacaggtctgactcgagtgcgtcgttttgctcaggatgatgcgcatatc
ttttgtactatggagcagctagaaaaggagataaaagattgtttggacttccttcaagct
gtatactcagtttttggattcacttttcggttgttcctctccacaaggccagatgagttt
ctaggggatgttaaggtctgggaggaagctgaaaagcaattagaacaaagcttgcaagaa
tttggagagccctgggagctgaatcctggagatggagcattctatggacctaagattgac
attcagattaaagatgcgattggccgctaccatcagtgtgcaacaattcaactggacttt
cagcttcctatacgatttgacttgaattatgtgagcaaaggtggtgaattgcagagacca
gtgatgattcatcgtgcgatcttgggctccgtagaaaggatgattgctgtcttagctgag
aactatgctggaaaatggccgctatggttgtctcccaatcaagtgatgatcattcctgtt
ggtgtttctgcagaacaatatgcacaggaggtgtggcaactgtttcatgacaccggtttc
atggttgacattgacacagacacaggagtaacctttaacaaaaaaatccgtaatgctcaa
ctttctcaatacaactttatactagtggttggagaccaggaacaaatgaagggaacagtg
aatgtacggaccagaactgggaaacagcatggagagtttctggttggtgaggcaattcaa
aggataagcagactgcgcgatatgaaggtgaagaatgctgaagaggagttttaa
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