Oncorhynchus tshawytscha (Chinook salmon): 112222708
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Entry
112222708 CDS
T05605
Symbol
tars2
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112222708 (tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112222708 (tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112222708 (tars2)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
112222708 (tars2)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112222708 (tars2)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112222708 (tars2)
Prokaryotic type
112222708 (tars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
112222708
NCBI-ProteinID:
XP_024241201
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All DBs
Position
LG23:27204784..27228178
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AA seq
693 aa
AA seq
DB search
MLVTVMLRFPVCRPSVRAVLHCQRRFSKIQASPALSERVRVFESLRERQGQQRTSGTTKQ
AFSVRLADGRTMNGTTGVTTPSIIAQNARVKGALVCRVNGELWELLRPLEADCELQLLGF
NTTEGKQAVWRTGACVVGWVLERVFGVDVCREGVSESGLYCDHLPENSALSLAELEQRCK
EAAGQKLPLSRLELNRQEVTELFQDNALRLQLVEEQMSGPTVTVYRCGDSIGVCNGPLLP
NTGLLKVFKMLQVSPVTLTNPVGTSGVMRVMGVAFPGEREREEWEREQEETRKRDHRRIG
KDQELFFFNDVSPGSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYSTALWERSG
HWEHYSENMFTVTGDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSG
ALGGLTRVRRFCQDDAHIFCTPEQLEEEIIACLDFVRSVYRVFGFSFHCLLSTRPTPCLG
EPALWDHAEQQLERSLQQFGERWQFNPGDGAFYGPKIDIQIKDAIGRQHQCATIQLDFQL
PIRFDLQYVGGDGETHRPVMVHRAVLGSLERMIAILAENFGGKWPLWLSPAQVMIIPVGG
GSESYAQQVVRQFREAGFMADTDDDQGATLNKKIRSAQLAQYNYIFVVGEKECVSGTVSV
RTRGGKQLGRRPTEKVLASLTHLRDARSNQDDF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaccgtgatgttacggtttcccgtctgtcggccgtcagttcgggcagtgctt
cactgtcagaggcgctttagcaagatacaggcatcccctgctctgtctgagcgtgtgcgg
gtgtttgagtctctcagagagaggcagggacagcagaggacaagcggcaccacgaaacag
gccttcagcgtccgattggctgatggcaggacgatgaatggcaccacaggcgtgaccacg
ccgtcaatcatcgctcaaaacgcacgtgtgaaaggtgctctggtctgcagggtgaatgga
gagctgtgggagctgcttcgccccctggaggctgactgtgaactacagctgctaggcttc
aacaccacagagggcaaacaggcggtgtggaggacaggagcgtgtgttgtggggtgggtg
ttagagagggtttttggggtggatgtgtgcagagagggtgtgtcagagtctggcctctac
tgtgaccacctcccggagaacagtgccctgtccctagctgagctagagcagagatgtaag
gaggccgctggccagaagcttcctctctccagactggagctgaacaggcaggaagttaca
gagctcttccaggacaatgctctgagactccagttggttgaagaacagatgagtggacct
actgtcacagtctacaggtgtggagacagcataggagtctgcaatggtcctctcctccct
aacactggtctcctcaaggtcttcaagatgctgcaggtgtctcccgtaacgttgaccaat
cctgttggcacgtcaggcgtgatgcgtgtgatgggtgtggccttcccaggagagagggag
agggaggagtgggagagggaacaggaggagacacggaagagagaccacagacgcatcggc
aaggaccaggagctgttcttctttaatgacgtcagtcctggaagctgcttcttcctgcct
aaaggagctcacatctacaacacactcgctgactttatcaagactgagtacagaaggcgt
ggcttccatgaggttgtgacccctactctatacagcactgcactgtgggagcgttcgggt
cactgggaacactacagtgaaaacatgtttactgtgaccggtgacacacacacctatgca
ctcaaacccatgaactgtcctgcacactgtctgatgtttgagcagcgtgtaaggtcatgg
agggagctcccgttgcgttgggccgatttcggggcactgcatcggaacgagctgtccggc
gctctgggtggtctcacccgggtccgcaggttctgccaggacgacgcacacatcttctgc
actcccgaacagttggaggaggagatcatagcgtgtttggactttgtgaggagtgtgtat
cgagtatttggattctccttccactgtctcctctctacccgacctacaccctgcctgggg
gagcctgcactgtgggaccacgctgagcagcagttggagaggagtctgcagcagtttgga
gagcgctggcagttcaacccaggagatggagcgttctacgggccgaagattgacatccag
atcaaggacgccattggtcgacagcaccagtgtgccaccatccaattggacttccagcta
ccaatcagatttgacctgcagtatgtggggggggatggagagacccacaggccagtgatg
gtccacagagctgttctgggatcattggaacgcatgatcgctatattggctgagaatttt
ggggggaaatggcctctgtggttgtctccagcgcaggtcatgattattcctgtaggggga
ggtagtgagtcatatgcgcaacaggtggtccgacagttccgcgaggctggcttcatggct
gacacggatgatgaccagggtgccaccttaaataagaagatccgctctgcacagctggcc
cagtacaactacatatttgtggtaggtgagaaggagtgtgtgagtggcacggtgagtgta
aggaccagaggggggaagcagctagggaggagaccgacagagaaggtcctggcatcactc
acacacctacgagacgcacggagcaaccaggatgacttctaa
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