Oryzias melastigma (Indian medaka): 112143925
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Entry
112143925 CDS
T07439
Symbol
tars2
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112143925 (tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112143925 (tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112143925 (tars2)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
112143925 (tars2)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112143925 (tars2)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112143925 (tars2)
Prokaryotic type
112143925 (tars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
112143925
NCBI-ProteinID:
XP_024123937
Ensembl:
ENSOMEG00000009022
LinkDB
All DBs
Position
LG16:complement(7572739..7582921)
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AA seq
687 aa
AA seq
DB search
MAVTRLVRLVACGSAARVTFRGYSKVSPSSSERLLVFESLKSKRAHQRVPEKPLRIHVGD
GRIVKGTATVTTPLAVAQSVRVKGALVSKVNGELWELGRPLEADCELQLLGFDTVEGKLA
AWRTAACVLSGVLEQTFAAEVCREGASAFGFFCDHVLDDGSALSLTDVELRCKAAAALNL
PLSRLDLNTEEFQELFQGSTMRLQLSEDQMNGSTITVYRCGDGLAVCSGPLLPHTGFLKV
FKMLQLSSVTLANQTEPSVLRRLLGVAFPGEKEMGEWEREQEEARRRDHRRIGTDQELFF
FNDVSPGSCFFLPKGTHIYNTLTDFIKSEYRRRGFSEVVTPTLYSTALWERSGHWEHYSD
NMFTVTLEGSQTFALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSGALGGLT
RVRRFCQDDAHIFCTPEQLEEEIVSCLDFVRSVYQVFGFSFHCLLSTRPTPCLGEPELWD
SAEQQLQSSLQQFGEHWELNPGDGAFYGPKIDILIKDAIGRQHQCATIQLDFQLPIRFDL
QYVGRDGQLHRPVMIHRAVLGSLERMIAILAENFGGKWPLWLSPAQIMVLPVGGNSEPYA
RQVVQQFTEAGFMVDLNADQGATLNKKIRSAQLAQYNYIFVVGDKENESGTVNVRSRGGN
QLGRRPVVEVLRSLSQLRDSRSNLDQF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacacggctggttcggttggtcgcttgtgggtcggcagcacgcgtgactttc
cgcggttacagcaaggtgtcaccatcttcatctgagcgtctgcttgtttttgagtcttta
aagtccaaacgagctcatcaaagagtcccagaaaagcctctcagaatccatgtgggcgat
ggccggattgtaaagggaacggcgactgtgaccacgcctctcgcagttgcacaaagtgtg
cgggtaaaaggggctctggtgagtaaagtgaatggggagctctgggagcttgggcgacct
ctagaggcagactgtgaactgcagcttcttgggtttgacacagttgaaggaaaactggca
gcatggaggactgcagcgtgtgtcctgagtggcgtattggaacaaacatttgctgctgag
gtgtgcagagagggagcttcagcgtttgggtttttctgtgatcatgtgctggacgacggc
agtgccttatctctaacggatgtggagctgagatgtaaggcggcagcagctctcaatctt
cccttgtccaggctggatctgaatactgaggagttccaagaacttttccaggggagtact
atgaggctgcagctttctgaagatcagatgaatggctccactattacagtctacaggtgt
ggagatggcttagcagtgtgcagcggccccctccttcctcacacgggctttcttaaggtc
ttcaagatgctacaactgtcctccgtgaccctggccaatcagactgagccgtcggttctg
aggcgtctgttaggcgtggcgtttccaggagagaaggaaatgggggagtgggagagagag
caggaggaggcgaggaggagggaccacaggcgcattgggacggaccaggagctgttcttc
ttcaacgatgtgagtccgggcagctgcttcttccttcctaaaggaacccacatctacaac
accctcacagacttcattaagagtgaatacagaaggcggggcttctccgaggttgtgacc
cccaccctgtacagcactgcattgtgggagcgctcgggccactgggagcactacagcgac
aacatgttcaccgtgactttagagggctctcagacatttgccctcaagcccatgaactgc
cccgcacactgcctcatgtttgagcagcgcgtgcgctcgtggcgggagctgcctctgcga
tgggcagacttcggcgccctgcaccggaacgagctctccggagctctgggaggtctgacc
cgagtccggaggttctgccaagacgacgctcacatcttctgcacacctgaacagctcgag
gaggagatcgtttcctgtttggactttgtgcgcagcgtctatcaggtgtttggattctcc
ttccactgcctgctgtccacacgtcccacgccgtgtctcggggagcctgagctgtgggac
agcgccgagcagcagctacagagcagtctgcagcagtttggagaacactgggagttaaac
cctggagatggagccttttatggaccaaagatcgacatcttgattaaagatgcaatcggc
cggcagcaccagtgcgccacgatccagctggacttccagctgccgatccggttcgacctg
cagtatgtgggacgagacggacagctgcacagaccggtgatgatccacagggcagttctg
ggctctctggagagaatgatcgctattttggctgaaaactttggtgggaaatggcccctc
tggttgtctccagctcagatcatggttcttcctgtagggggcaacagtgagccatacgcc
agacaggtagttcagcagttcactgaagctggcttcatggtggatttgaacgctgatcaa
ggtgccaccttaaataagaagattcgctctgctcagctggctcagtacaactacatattt
gtggtgggtgataaggagaatgagagtggaacggtgaacgtccgcagcagaggggggaac
cagcttggcaggaggccggtggtggaagtgctccgatctctctcacagctgagagactcc
aggagcaatctggaccagttctga
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