Daphnia magna (water flea): 116919272
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Entry
116919272 CDS
T07514
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116919272
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmk01007
]
116919272
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116919272
Enzymes [BR:
dmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
116919272
Amino acid related enzymes [BR:
dmk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116919272
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116919272
Prokaryotic type
116919272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
116919272
NCBI-ProteinID:
XP_032781134
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Position
LG3:complement(3291614..3294878)
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AA seq
759 aa
AA seq
DB search
MFSRGVWLFSSRFNQFHANIGLLVPILHQPFDRRDPDYFRFSKPRRTIQTSAPAEAKSKG
DGKPKGEAKQKGEAKPKAEVKTTLKELNPWPVYIQDRIALWDKLKAEADAAIAAKVPTPI
QITLPDGKIVEGNSWRTSPFDIASGISAGLAENTVIAKVNGKLWDLDRPLEESCSLQLLK
FDDEDAQKVFWHSTAHILGEALERCYGGCLCYGPPIENGFYYDMFIQDQQVSNFDFPVLE
NVMKAAIKEKQPFERLEMKKEDLLEMFKYNEFKVRILNEKVDTPTTTAYRCGPLIDLCLG
PHVRHTGKIKAFQITKNSSTYWEGKADAESLQRVYGISFPDNKQLKEWQRIQEEAAKRDH
RKLGREYELFFFHELSPGACFFTPHGAHIYNTLVDFLRNEYRQRGFQEVITPNVYNSKLW
LTSGHWQHYSENMFSFEVEKETYAMKPMNCPGHCLLFDHRVRSWRELPLRLADFGVLHRN
ELSGALSGLTRVRRFQQDDAHIFCTMGQIKNEINGALAFLRDVYQIFGFTFQLRLSTRPE
KYLGEIETWNHAEKELTESLNEFGEAWQLNPGDGAFYGPKIDITIMDALRRPHQCATIQL
DFQLPIRFNLSFINESGEKEKPVIIHRAILGSVERMIAILTESYAGKWPFWLSPRQCVVV
PVGPMFDGYAQQVREQIAAAGFRITADIDAGDTMNKKIRNGQLSQHNFILVVGEKEQTNG
TVNIRTRDNKVHGEHSVAKVIERFTQLSKERILNSEDSF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgaggtgtttggttgttttcctcccgattcaatcaatttcatgcaaatatt
ggtctattggtgccaatattgcatcagccatttgatagacgtgatcccgattacttccgg
ttcagcaagcccaggagaacaattcaaacctcggcaccagcagaggcaaaatctaaagga
gatggtaagcctaaaggagaagctaagcagaagggagaggccaagccaaaagcggaggtc
aagactactctgaaggagctcaacccctggcctgtgtacatccaagatcgtattgctcta
tgggataagctgaaagccgaagctgatgcagccattgcagcaaaggtgcccactccgatt
caaatcactctaccagatggaaagattgtagaggggaattcctggcgcacatcaccattt
gatattgccagtggcataagtgctggactagcagaaaacacagtgattgccaaagtcaat
ggcaagctatgggaccttgacagacctttagaggaaagttgttctttgcaacttcttaag
tttgatgatgaagatgcacagaaagtcttttggcactccactgcccatattttgggagaa
gccttggagaggtgttatggaggctgtttgtgttatggtcctcctattgaaaatggattc
tactatgacatgttcatccaagaccaacaagtgtccaactttgacttcccggttcttgag
aatgtcatgaaagccgccattaaagaaaaacagccctttgagcgccttgaaatgaaaaaa
gaagatttgttagagatgtttaaatataacgaattcaaagttcgcattctgaacgaaaag
gttgacactcctaccactactgcctaccggtgtggtccgttgatagatttgtgtcttggg
cctcatgtaagacacacagggaaaataaaggctttccaaattaccaaaaacagttccacg
tattgggaaggcaaagcagatgccgaatctcttcagagagtttacggtatttcatttccg
gataataaacagctgaaagagtggcaaagaattcaagaagaggcagctaagagggatcac
aggaaactgggacgagagtacgaactctttttctttcacgaactcagtcccggagcctgc
ttctttactccacacggcgcacatatttataatacgctcgtcgatttcctccgaaatgag
taccgacaacgcgggtttcaagaagtcataactccaaatgtctacaattccaaattgtgg
cttacgtctggccattggcagcattattcggagaatatgttttcctttgaagtggaaaaa
gaaacttacgcaatgaaaccaatgaattgccccggtcattgtttgttgtttgatcaccga
gttcgctcttggcgcgaactcccgttgcgtttagccgactttggagtactccatcgaaat
gagttatcgggagctctctccggtcttactcgagtacggcgtttccagcaggatgacgcc
catatcttctgcactatgggtcaaatcaagaacgagatcaatggcgccttagctttcctg
cgggacgtgtatcagatttttggatttactttccagcttcgcctttctacacgacctgaa
aagtatttgggagaaatcgaaacctggaatcacgctgaaaaggagctaactgaaagcttg
aacgaatttggagaggcttggcaattaaatcctggtgatggcgcattttatggtcctaaa
attgatatcactatcatggacgcactgcgccggccgcatcaatgcgcaactattcagttg
gatttccagctaccgatccgtttcaatttaagttttattaacgaatcgggcgagaaggag
aaacctgtcatcattcatcgtgctattctgggctctgtggagcgcatgattgccatctta
accgaaagctatgctggaaagtggccgttttggctgagtccgcgacaatgcgtcgtggtt
ccggttggtcccatgtttgatggctacgctcagcaggtaagggaacaaatagcagctgcg
ggattccgtataacggcagatattgatgcaggagatacgatgaataaaaaaatcagaaat
ggtcagttaagccagcacaactttatccttgtagtgggagaaaaggaacagactaatggc
acggttaatattcgcactcgtgataataaagttcacggagaacattctgttgccaaggtt
atagaacgtttcactcagttatcaaaagaaagaattttgaatagcgaagattcgttttga
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