Amycolatopsis mediterranei U32: AMED_5327
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Entry
AMED_5327 CDS
T01269
Symbol
thrS
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMED_5327 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amd01007
]
AMED_5327 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amd03016
]
AMED_5327 (thrS)
Enzymes [BR:
amd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
AMED_5327 (thrS)
Amino acid related enzymes [BR:
amd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AMED_5327 (thrS)
Transfer RNA biogenesis [BR:
amd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AMED_5327 (thrS)
Prokaryotic type
AMED_5327 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
ADJ47089
UniProt:
A0A0H3DBU8
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All DBs
Position
complement(5900903..5902930)
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AA seq
675 aa
AA seq
DB search
MSQSPPVSPVAASRVVVPAGTTAGAAVREAGLPTKGEDTVVVVRDAEGKLRDLAWVPEAD
AEVEPVAANTEDGRSVIRHSAAHVLAQAVQQQFPDAKLGIGPPVKDGFYYDFAVDKPFTP
EDLQALEKRMKQIVKGAQQFSRRVFDSVDEARKELADEPFKLELVDLKSEVDTSEVMEVG
EGELTIYDNLDPRTKERVWSDLCRGPHVPTTKFIPAFKLTRVAAAYWRGSEKNPQLQRIY
GTAWESAEAQDAYLERIAEAERRDHRKLGAELDLFSFPEEIGSGLPVFHPKGGIIRRELE
NYSRRRHEEAGYEFVNTPHISKGELFHTSGHLPYYADTMFPPVQFDEENYYLKAMNCPMH
NLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTKEQMPGEL
RSLLKFVLDLLADYGLSDFYLELSTRGDSDKFIGEDWEWEEATETLRQAAVDSGLELVPD
PGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNQNKRFGLEYTAPDGSRQTPVMIHRALF
GSIERFFGVLTEHYAGAFPAWLSPVQVVGIPITADQVEYLQDVEKALRAKGLRAEVDASD
DRMQKKIRTHTTQKVPFMLLAGAKDVEAGAVSFRFRDGGQINGVPVEKAVEAIAEWVERR
ENASPSAEALETIVR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccagtcgccccccgtttcccccgtggccgcctcccgtgtggtggtaccggcgggt
actacggcgggcgcggcggtccgcgaagccggtctgccgaccaagggcgaggacacggtc
gtcgtggtccgcgacgccgagggcaagctgcgcgacctcgcctgggtgcccgaagccgac
gccgaggtcgagccggtcgccgcgaacaccgaagacggccgcagcgtcatccgccactcg
gcggcacacgtgctcgcccaagccgtccagcagcagttcccggacgccaagctgggcatc
ggtccgccggtcaaggacggtttctactacgacttcgcggtcgacaagccgttcaccccc
gaggacctgcaggcgctcgaaaagcgcatgaagcagatcgtgaagggcgcccagcagttc
tcgcggcgcgttttcgactccgtcgacgaggccaggaaagaactcgccgacgagccgttc
aagctcgaactcgtggacctcaagtccgaagtggacacctccgaggtgatggaggtcggc
gagggtgaactcaccatctacgacaatctcgacccgcgcaccaaggaacgtgtctggagt
gacctctgccgtggtccgcacgtgccgaccacgaagttcatcccggcgttcaagctgacc
cgcgtcgccgccgcgtactggcggggcagcgaaaagaacccgcagctgcagcggatctac
ggcaccgcgtgggagtcggccgaggcgcaggacgcctacctcgagcgcatcgccgaggcc
gagcgccgcgaccaccgcaagctcggcgccgagctggacctgttctccttccccgaggag
atcggctccggcctgccggtgttccacccgaagggcggcatcatccgccgcgagctggag
aactactcgcgccgccgccacgaagaggccggctacgagttcgtgaacaccccgcacatc
agcaagggggagctgttccacacctccggccacctgccctactacgccgacacgatgttc
ccgccggtgcagttcgacgaggagaactactacctcaaggcgatgaactgcccgatgcac
aacctgatcttccgctcgcgcgggcggtcctaccgcgagctgccgctgcggctgttcgag
ttcggcacggtgtaccgctacgagaagtccggcgtggtgcacggcctcacccgcgtgcgc
ggcctgacgatggacgactcgcacatctactgcaccaaggagcagatgccgggcgagctg
cggtcgctgctcaagttcgtcctcgacctgctcgccgactacggcctctccgacttctac
ctcgagctgtcgacccgcggtgactccgacaagttcatcggcgaggactgggagtgggag
gaggccaccgagacgctgcggcaggccgccgtcgactccggcctcgagctggtcccggac
ccgggcggcgcggccttctacggcccgaagatctcggtgcaggccaaggacgcgatcggc
cgcacctggcagatgtcgaccatccagctggacttcaaccagaacaagcggttcgggctc
gagtacaccgcgccggacggctcgcgccagacgccggtgatgatccaccgcgcgctgttc
gggtcgatcgaacgcttcttcggcgtgctcaccgagcactacgcgggtgccttcccggcg
tggctgtcgccggtgcaggtggtcggcatcccgatcaccgccgaccaggtcgagtacctg
caggacgtcgagaaggcgttgcgcgccaaggggctccgcgccgaggtcgacgccagcgac
gaccggatgcagaagaagatccgcacgcacaccacgcagaaggtgcccttcatgctgctg
gccggcgcgaaggacgtcgaggcgggcgcggtgtcgttccgcttccgcgacggcggccag
atcaacggcgtgccggtggaaaaggcggtcgaggcgatcgcggagtgggtcgagcgccgc
gaaaacgcgtcgccgtcggccgaggcgctggagacgatcgttcggtga
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