Anoplopoma fimbria (sablefish): 129101252
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Entry
129101252 CDS
T09102
Symbol
tars3
Name
(RefSeq) LOW QUALITY PROTEIN: threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129101252 (tars3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129101252 (tars3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129101252 (tars3)
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
129101252 (tars3)
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129101252 (tars3)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129101252 (tars3)
Prokaryotic type
129101252 (tars3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
129101252
NCBI-ProteinID:
XP_054466965
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Position
2:26560174..26571712
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AA seq
822 aa
AA seq
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MAECLAARLSSQEEQVRLLSKEIFNLRDGLSRGVDAAGVSAGVSPELDSLRTENEKLQYR
LLHLRRGLQAELELEVEGGGEVEKKQQQVKCGKALEKNTSREQQPNNRADRKVQGENPDT
KPADKNKNKKEKKQDKGQGNGAVKEQKSLPGYVAERLSLYEELKRESDALLAKRAAASKP
ITVELPDGQKVVGKAWVTTPYQLACDISQGLADNAVISRVNGELWDLDRPLEQDCSLEIL
RFDNDDAQAVYWHSSAHILGEAMEHFYGGCLCYGPPIENGFYYDMFLDGQKGVSSTEFGD
LETLCKAVVKEKQPFERLEISKETLLKMFKYNKFKCRILNEKVSTPTTTVYRCGPLIDLC
RGPHVRHTGKIKAMKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEAKNR
DHRKIGKDQELFFFHDLSPGSCFFLPRGAHIYNTLTEFIRDEYWRRGFQEVASPNIYNSK
LWETSGHWQHYSENIFSFPVEDDIFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGVLH
RNELSGTLTGLTRVRRFQQDDAHIFCMMDQIGSEMKGCLDFLRCVYDVFGFSFQLHLSTR
PEKYLGDIAVWNRAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIQIKDAIGRYHQCATI
QLDFQLPVRFDLTFVGKDGDDKARPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQV
MLVPVNPSCEDYAKKVCKQFTEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKEK
MTNGVNVRTRDNKVHGEMSAAEVLARLTLLKQCRCPNAEEEF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcctcgcagcacgcttgtccagccaggaggagcaggtacggctcctcagc
aaggagatcttcaacctccgggatgggctgagccgaggtgtggatgcagccggggtctct
gcgggggtttccccggagctggacagcctgaggaccgagaacgagaagctccagtaccgg
ctgctgcacctccggaggggtctgcaggcagagctggagctggaggtggaggggggtggg
gaggtggagaagaaacaacaacaggtgaaatgtggcaaagctctggagaaaaacaccagc
agagaacagcagccaaacaaccgagctgatagaaaggtgcagggggagaacccggatacc
aaaccagctgacaagaacaagaacaagaaggagaaaaagcaggataagggacaaggaaac
ggagccgtgaaggagcagaagtcgttgcctggatacgtagccgagcgcctcagcctctat
gaggagctgaagagggagagcgacgccctgctggcaaagagagctgcggccagcaagccc
atcaccgtggagctgccggacggacagaaggtggtgggcaaagcgtgggtcaccacaccg
taccagttggcttgtgacatcagccagggcctggccgacaacgctgtgatttcccgggtt
aacggagagctctgggacctggacagacccctcgagcaggactgctccctagagatcttg
cgctttgacaatgacgatgctcaggctgtgtattggcactccagtgctcacatcctgggg
gaggcaatggagcacttttatggcggttgtttgtgttatggaccccccattgagaacggc
ttctactatgacatgttcctggatggacagaaaggggtatccagcactgagttcggggac
ctggagactctgtgtaaggccgttgtgaaggaaaaacagccctttgagaggctggaaatc
agcaaggagaccctgttgaaaatgtttaagtacaacaaattcaagtgccgcatcctgaat
gagaaagtcagcacccccaccacaacagtctacagatgtggacccttgatcgacttgtgc
agagggccccatgtcaggcataccggcaagatcaaggccatgaagatctacaagaactct
tccacctactgggagggccgctccgacatggagactctacagaggatctatgggatctcc
ttccccgactcaaagatgctgaaggagtgggaacgttttcaagaggaggccaagaacaga
gaccatcgcaagattggcaaagatcaggagctgttcttcttccatgacctcagccctggc
agttgtttcttcctgccacgaggagcccacatctacaacacgctcaccgagttcatcagg
gacgagtattggaggagaggctttcaggaagtagcctctccaaacatttataacagcaaa
ctgtgggagacatcgggccactggcaacactacagcgagaacatcttctccttccccgtg
gaggacgacatctttgcgctcaagcccatgaactgccccggccactgcctgatgttcagt
caccggcctcgctcgtggagggagcttcccttgaggctggcggatttcggggtcctccac
agaaatgagctgtccggaacgctgaccgggctgaccagagtgcggcgtttccagcaggac
gacgctcacattttctgcatgatggaccagatcgggtcagagatgaagggctgccttgac
ttcctccgctgcgtctacgatgtgttcgggttctccttccagcttcacctctcaactcgt
ccggagaagtatctgggcgacatcgctgtgtggaaccgggccgaaaagcaactggagaac
agcctgaatgagtttggggagccatggaaactaaaccctggagacggggctttttacgga
cccaagatcgacatccagatcaaagacgcaatcgggcgttaccaccagtgcgcgaccatt
cagctggacttccagctgccggtccgcttcgacctgacctttgtggggaaggatggggat
gacaaagcgcgaccagtcatcatccatcgcgccatcttgggctccgtggagaggatgatc
gccattctcacagagaactatgcggggaaatggcctctgtggctctctccccgtcaggtg
atgttagtgcccgtcaacccgtcctgtgaggattacgccaagaaggtgtgtaagcagttt
acagaggctggtttcatggcagacgctgacttagactccagctgtcttctcaacaagaaa
atccgtaacgcacagttggcccaatataacttcattcttgtggtcggggagaaggagaag
atgactaacggcgtcaacgtgcgcacccgggacaacaaagtccacggagagatgtcggct
gccgaggtgctggctcgcctgaccctgctcaaacaatgccgctgtccaaacgcagaggag
gagttctga
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