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inference_mul.py
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#!/usr/bin/env python
# -*- coding:utf-8 -*-
#!/usr/bin/env python
# -*- coding:utf-8 -*-
import math
import os
import argparse
import logging
import json
import time
import re
from tqdm import tqdm
import sys
import torch
from transformers import T5TokenizerFast, T5ForConditionalGeneration
from uie.seq2seq.constraint_decoder import get_constraint_decoder
from uie.seq2seq.models import T5Prompt
from uie.sel2record.record import MapConfig
from uie.sel2record.sel2record import SEL2Record
from uie.extraction.scorer import *
from uie.extraction.record_schema import RecordSchema
logger = logging.getLogger(__name__)
split_bracket = re.compile(r"\s*<extra_id_\d>\s*")
special_to_remove = {'<pad>', '</s>'}
cwd = os.getcwd()
def read_json_file(file_name):
return [json.loads(line) for line in open(file_name)]
def schema_to_ssi(schema: RecordSchema):
ssi = "<spot> " + " <spot> ".join(sorted(schema.type_list))
ssi += "<asoc> " + " <asoc> ".join(sorted(schema.role_list))
ssi += " <extra_id_2> "
return ssi
def post_processing(x):
for special in special_to_remove:
x = x.replace(special, '')
return x.strip()
def schema_to_spotasoc(schema: RecordSchema, tokenizer):
spots = []
asocs = []
for spot in sorted(schema.type_list):
spots.append(tokenizer.encode(spot, add_special_tokens = False))
for asoc in sorted(schema.role_list):
asocs.append(tokenizer.encode(asoc, add_special_tokens = False))
return spots, asocs
class HuggingfacePromptPredictor:
def __init__(self, decoding_format = 'spotasoc', source_prefix = '', args = None) -> None:
self._tokenizer = T5TokenizerFast.from_pretrained(args.model)
logger.info(f"Tokenizer Length: {len(self._tokenizer)}")
self._device = f"cuda:{args.cuda}" if torch.cuda.is_available() else "cpu"
logger.info(f"Device: {self._device}")
self._model = T5Prompt(self._tokenizer, args.t5_path, args).to(self._device)
self._model.load_state_dict(torch.load(os.path.join(args.model, 'pytorch_model.bin'), map_location=self._device))
self._model.eval()
self._max_source_length = args.max_source_length
self._max_target_length = args.max_target_length
self._use_ssi = args.use_ssi
self._args = {"num_beams": args.num_beams, "do_sample": args.do_sample, "top_k": args.top_k, "top_p": args.top_p}
self.task_name = args.task
def load_schema(self, record_file, CD):
logger.info(f"record_file: {record_file}")
self._schema = RecordSchema.read_from_file(record_file)
spots, asocs = schema_to_spotasoc(self._schema, self._tokenizer)
self._ssi = schema_to_ssi(self._schema)
self._spots = spots
self._asocs = asocs
logger.info(f"ssi: {self._ssi}")
logger.info(f"spots: {self._spots}")
logger.info(f"asocs: {self._asocs}")
if CD:
self.constraint_decoder = get_constraint_decoder(tokenizer = self._tokenizer,
type_schema = self._schema,
decoding_schema = 'spotasoc',
source_prefix = '',
task_name = self.task_name)
else:
self.constraint_decoder = None
def predict(self, text):
func = None
def CD_fn(batch_id, sent):
src_sentence = inputs['input_ids'][batch_id]
return self.constraint_decoder.constraint_decoding(src_sentence = src_sentence, tgt_generated = sent)
if self.constraint_decoder is not None:
func = CD_fn
if self._use_ssi:
text = [self._ssi + x for x in text]
inputs = self._tokenizer(text, padding=True, return_tensors='pt').to(self._device)
inputs['input_ids'] = inputs['input_ids'][:, :self._max_source_length]
inputs['attention_mask'] = inputs['attention_mask'][:, :self._max_source_length]
result = self._model.generate(
input_ids=inputs['input_ids'],
attention_mask=inputs['attention_mask'],
spot=[self._spots] * inputs["input_ids"].size(0),
asoc=[self._asocs] * inputs["input_ids"].size(0),
prefix_allowed_tokens_fn=func,
**self._args
)
return self._tokenizer.batch_decode(result, skip_special_tokens=False, clean_up_tokenization_spaces=False)
class HuggingfacePredictor:
def __init__(self, decoding_format = 'spotasoc', source_prefix = '', args = None) -> None:
self._tokenizer = T5TokenizerFast.from_pretrained(args.model)
self._model = T5ForConditionalGeneration.from_pretrained(args.model)
self._model.cuda(f"cuda:{args.cuda}")
self._max_source_length = args.max_source_length
self._max_target_length = args.max_target_length
self._args = {"num_beams": args.num_beams, "do_sample": args.do_sample, "top_k": args.top_k, "top_p": args.top_p}
self.task_name = args.task
def load_schema(self, record_file, CD):
logger.info(f"record_file: {record_file}")
self._schema = RecordSchema.read_from_file(record_file)
self._ssi = schema_to_ssi(self._schema)
logger.info(f"ssi: {self._ssi}")
if CD:
self.constraint_decoder = get_constraint_decoder(tokenizer = self._tokenizer,
type_schema = self._schema,
decoding_schema = 'spotasoc',
source_prefix = '',
task_name = self.task_name)
else:
self.constraint_decoder = None
def predict(self, text):
func = None
def CD_fn(batch_id, sent):
src_sentence = inputs['input_ids'][batch_id]
return self.constraint_decoder.constraint_decoding(src_sentence = src_sentence, tgt_generated = sent)
if self.constraint_decoder is not None:
func = CD_fn
text = [self._ssi + x for x in text] # SSI作前缀
inputs = self._tokenizer(text, padding=True, return_tensors='pt').to(self._model.device)
inputs['input_ids'] = inputs['input_ids'][:, :self._max_source_length]
inputs['attention_mask'] = inputs['attention_mask'][:, :self._max_source_length]
result = self._model.generate(
input_ids=inputs['input_ids'],
prefix_allowed_tokens_fn=func,
attention_mask=inputs['attention_mask'],
max_length=self._max_target_length,
**self._args
)
return self._tokenizer.batch_decode(result, skip_special_tokens=False, clean_up_tokenization_spaces=False)
task_dict = {
'entity': EntityScorer,
'relation': RelationScorer,
'event': EventScorer,
}
def do_predict(predictor, output_dir, split_name, batch_num, options, text_list):
predicts = list()
if os.path.exists(os.path.join(output_dir, f'{split_name}_preds_seq2seq.txt')):
with open(os.path.join(output_dir, f'{split_name}_preds_seq2seq.txt'), 'r') as reader:
for line in reader:
predicts.append(line.strip())
return predicts
for index in tqdm(range(batch_num)):
start = index * options.batch_size
end = index * options.batch_size + options.batch_size
pred_seq2seq = predictor.predict(text_list[start: end])
pred_seq2seq = [post_processing(x) for x in pred_seq2seq]
predicts += pred_seq2seq
with open(os.path.join(output_dir, f'{split_name}_preds_seq2seq.txt'), 'w') as output:
for pred in predicts:
output.write(f'{pred}\n')
return predicts
def do_sel2record(predicts, sel2record, text_list, token_list, output_dir, split_name):
records = list()
if os.path.exists(os.path.join(output_dir, f'{split_name}_preds_record.txt')):
with open(os.path.join(output_dir, f'{split_name}_preds_record.txt'), 'r') as reader:
for line in reader:
records.append(json.loads(line.strip()))
return records
for p, text, tokens in zip(predicts, text_list, token_list):
r = sel2record.sel2record(pred=p, text=text, tokens=tokens)
records += [r]
with open(os.path.join(output_dir, f'{split_name}_preds_record.txt'), 'w') as output:
for record in records:
output.write(f'{json.dumps(record)}\n')
return records
def main():
parser = argparse.ArgumentParser()
parser.add_argument('--dataname', default='relation/NYT')
parser.add_argument('--model', default='hf_models/mix')
parser.add_argument('--task', default='relation')
parser.add_argument('--iter_num', default=7, type=int)
parser.add_argument('--cuda', default='0')
parser.add_argument('--t5_path', default='hf_models/mix', type=str)
parser.add_argument('--max_source_length', default=256, type=int)
parser.add_argument('--max_target_length', default=192, type=int)
parser.add_argument('--batch_size', default=256, type=int)
parser.add_argument('--config', dest='map_config', help='Offset Re-mapping Config', default='config/offset_map/closest_offset_en.yaml')
parser.add_argument('--decoding', default='spotasoc')
parser.add_argument('--verbose', action='store_true')
parser.add_argument('--match_mode', default='set', choices=['set', 'normal', 'multimatch'])
parser.add_argument('--mode', default='H')
parser.add_argument('--CD', action='store_true')
parser.add_argument('--use_prompt', action='store_true')
parser.add_argument('--use_prefix', action='store_true')
parser.add_argument('--use_ssi', action='store_true')
parser.add_argument('--prompt_len', default=10, type=int)
parser.add_argument('--prompt_dim', default=512, type=int)
parser.add_argument('--do_sample', action='store_true')
parser.add_argument('--num_beams', default=None, type=int)
parser.add_argument('--top_k', default=None, type=int)
parser.add_argument('--top_p', default=None, type=float)
options = parser.parse_args()
map_config = MapConfig.load_from_yaml(options.map_config)
# only F1 value
if options.task == "relation":
tgt = [18, 24, 30, 36]
elif options.task == "event":
tgt = [42, 48, 54, 60]
elif options.task == "entity":
tgt = [6, 12]
if options.use_prompt:
predictor = HuggingfacePromptPredictor(args=options)
else:
predictor = HuggingfacePredictor(args=options)
data_folder = []
for it in range(1, options.iter_num + 1):
data_folder.append(os.path.join(options.dataname, f"/iter_{it}"))
data_folder = sorted(data_folder, key=lambda x:x)
print(data_folder)
number_dict = {}
for data in data_folder:
options.data_folder = data
model_path = '_'.join(options.model.split('/')[1:]).replace('/', '_')
if options.num_beams != None:
model_path += f'_beam{options.num_beams}'
if options.do_sample:
if options.top_k != None:
model_path += f'_topk{options.top_k}'
if options.top_p != None:
model_path += f'_topp{options.top_p}'
os.makedirs(os.path.join('output_infer', model_path), exist_ok = True)
data_dir = data.replace('/', '_')
output_dir = os.path.join('output_infer', model_path, data_dir)
if options.CD:
output_dir += '_CD'
if os.path.exists(output_dir) and os.path.exists(os.path.join(output_dir, 'test_results.txt')):
cur_time = time.strftime('%m_%d_%H_%M', time.localtime(time.time()))
output_dir += cur_time
os.makedirs(output_dir, exist_ok = True)
logging.basicConfig(
format="%(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout), logging.FileHandler(os.path.join('output_infer', 'log.txt'), mode = 'w', encoding = 'utf-8')],
)
logger.setLevel(logging.INFO)
logger.info(f"config: {vars(options)}")
logger.info(f"data: {data}")
predictor.load_schema(os.path.join('output_infer', 'record.schema'), options.CD)
schema_dict = SEL2Record.load_schema_dict(data)
sel2record = SEL2Record(
schema_dict=schema_dict,
decoding_schema=options.decoding,
map_config=map_config,
)
for split, split_name in [('test', 'test')]:
gold_filename = os.path.join(data, f'{split}.json')
text_list = [x['text'] for x in read_json_file(gold_filename)]
token_list = [x['tokens'] for x in read_json_file(gold_filename)]
batch_num = math.ceil(len(text_list) / options.batch_size)
predicts = do_predict(predictor, output_dir, split_name, batch_num, options, text_list)
records = do_sel2record(predicts, sel2record, text_list, token_list, output_dir, split_name)
results = dict()
for task, scorer in task_dict.items():
gold_list = [x[task] for x in read_json_file(gold_filename)]
pred_list = [x[task] for x in records]
gold_instance_list = scorer.load_gold_list(gold_list)
pred_instance_list = scorer.load_pred_list(pred_list)
sub_results = scorer.eval_instance_list(
gold_instance_list=gold_instance_list,
pred_instance_list=pred_instance_list,
verbose=options.verbose,
match_mode=options.match_mode,
)
results.update(sub_results)
with open(os.path.join(output_dir, f'{split_name}_results.txt'), 'w') as output:
for key, value in results.items():
output.write(f'{split_name}_{key}={value}\n')
number = []
with open(os.path.join(output_dir, f'{split_name}_results.txt'), 'r') as freader:
for i, line in enumerate(freader, 1):
if i in tgt:
logger.info(f"{line.strip()}")
number.append(line.strip().split("=")[-1])
number_dict[data] = number
for num in number:
logger.info(f"{num}")
for key, value in number_dict.items():
logger.info(key)
for it in value:
logger.info(it)
if __name__ == "__main__":
main()