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| taxon = Geodermatophilaceae
| taxon = Geodermatophilaceae
| authority = Normand 2006<ref>{{cite journal | author = Normand P. |title = ''Geodermatophilaceae'' fam. nov., a formal description | journal = Int J Syst Evol Microbiol | year = 2006 | volume = 56 |issue = 10 | pages = 2277–2278|doi = 10.1099/ijs.0.64298-0 |pmid = 17012547 | doi-access = free }}</ref>
| authority = Normand 2006<ref>{{cite journal | author = Normand P. |title = ''Geodermatophilaceae'' fam. nov., a formal description | journal = Int J Syst Evol Microbiol | year = 2006 | volume = 56 |issue = 10 | pages = 2277–2278|doi = 10.1099/ijs.0.64298-0 |pmid = 17012547 | doi-access = free }}</ref>
| type_genus = ''[[Geodermatophilales]]''
| type_genus = ''[[Geodermatophilus]]''
| type_genus_authority = Sen et al. 2014
| type_genus_authority = Luedemann 1968
| subdivision_ranks = Genera<ref>{{cite journal|last1=Parker|first1=Charles Thomas|last2=Garrity|first2=George M|editor1-first=Charles Thomas|editor1-last=Parker|editor2-first=George M|editor2-last=Garrity|title=Taxonomic Abstract for the genera.|journal=The NamesforLife Abstracts|year=2017|doi=10.1601/tx.30543|language=en}}</ref>
| subdivision_ranks = [[Genus|Genera]]<ref>{{cite journal|last1=Parker|first1=Charles Thomas|last2=Garrity|first2=George M|editor1-first=Charles Thomas|editor1-last=Parker|editor2-first=George M|editor2-last=Garrity|title=Taxonomic Abstract for the genera.|journal=The NamesforLife Abstracts|year=2017|doi=10.1601/tx.30543|language=en}}</ref>
| subdivision =
| subdivision =
<!-- Actinotelluria was reclassified as Klenkia. -->
* ''[[Actinotelluria]]''
* ''[[Blastococcus]]'' <small>Ahrens and Moll 1970 (Approved Lists 1980)</small>
* ''[[Blastococcus]]''
⚫
* ''[[Geodermatophilus]]''
⚫
* ''[[Cumulibacter]]'' <small>Huang ''et al''. 2017</small>
* ''[[Goekera]]''
* ''[[Geodermatophilus]]'' <small>Luedemann 1968 (Approved Lists 1980)</small>
* ''[[Klenkia]]'' <small>Montero-Calasanz ''et al''. 2018</small>
* ''[[Klenkia]]''
* ''[[Modestobacter]]'' <small>Mevs ''et al''. 2000</small>
* ''[[Modestobacter]]''
* ''[[Petropleomorpha]]''
}}
}}


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==Phylogeny==
==Phylogeny==
The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)<ref name=LPSN>{{cite web| author=A.C. Parte| url=https://lpsn.dsmz.de/family/Geodermatophilaceae| title=Geodermatophilaceae| access-date=2023-09-09| publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)| display-authors=et al.}}</ref> and [[National Center for Biotechnology Information]] (NCBI)<ref name=NCBI>{{cite web| author=Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=85030&lvl=3&lin=f&keep=1&srchmode=1&unlock| title=Geodermatophilaceae| access-date=2023-09-09| publisher=[[National Center for Biotechnology Information]] (NCBI) taxonomy database| display-authors=et al.}}</ref>
The currently accepted phylogeny is based on 16S rRNA-based LTP release 123 by [['The All-Species Living Tree' Project]]<ref>[['The All-Species Living Tree' Project]].{{cite web | url=http://www.arb-silva.de/fileadmin/silva_databases/living_tree/LTP_release_123/LTPs123_SSU_tree.pdf | title=16S rRNA-based LTP release 123 (full tree) | publisher=[[Silva Comprehensive Ribosomal RNA Database]] | accessdate=2011-11-17}}</ref>


{| class="wikitable"
⚫
{{Clade | style=font-size:75%;line-height:75%
|-
! colspan=1 | 16S rRNA based [[The All-Species Living Tree Project|LTP]]_08_2023<ref name=LTP>{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=20 November 2023}}</ref><ref>{{cite web|title=LTP_all tree in newick format|url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree |access-date=20 November 2023}}</ref><ref>{{cite web|title=LTP_08_2023 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf |access-date=20 November 2023}}</ref>
! colspan=1 | 120 marker proteins based [[Genome Taxonomy Database|GTDB]] 08-RS214<ref name="about">{{cite web |title=GTDB release 08-RS214 |url=https://gtdb.ecogenomic.org/about#4%7C |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="tree">{{cite web |title=bac120_r214.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref>
|-
| style="vertical-align:top|
⚫
{{Clade | style=font-size:90%;line-height:80%
|1={{clade
|1={{clade
⚫
|1={{clade
|1=''[[Blastococcus saxobsidens]]''
|1=''[[Blastococcus]]''
⚫
|2={{clade
|1=''[[Goekera]]''
⚫
|2=''[[Modestobacter]]''
⚫
}}
⚫
}}
|2={{clade
|2={{clade
|label1=''[[Blastococcus]]''
|1=''[[Klenkia]]''
⚫
|2=''[[Geodermatophilus]]''
⚫
}}
⚫
}}
}}
|
{{Clade | style=font-size:90%;line-height:90%
⚫
|1={{clade
⚫
|1={{clade
|1={{clade
|1={{clade
|1=''[[Goekera]]'' <small>Montero-Calasanz et al. 2023</small>
|1=''[[Blastococcus aggregatus|B. aggregatus]]''
|2=''[[Klenkia]]'' <small>Montero-Calasanz et al. 2018</small>
⚫
|2={{clade
|1=''[[Blastococcus endophyticus|B. endophyticus]]''
⚫
|2={{clade
⚫
|1=''[[Geodermatophilus terrae]]''
|2={{clade
|1=''[[Geodermatophilus soli]]''
|2=''[[Geodermatophilus taihuensis]]''
}}
}}
⚫
}}
}}
}}
⚫
|2=''[[Modestobacter]]'' <small>Mevs et al. 2000</small>
⚫
}}
⚫
|2={{clade
|1=''[[Petropleomorpha]]'' <small>Li 2023</small>
|2={{clade
|2={{clade
|1=''[[Blastococcus jejuensis]]''
|1=''[[Blastococcus]]'' <small>Ahrens & Moll 1970</small>
|label2=''[[Modestobacter]]''
|2=''[[Geodermatophilus]]'' <small>Luedemann 1968</small>
⚫
|2={{clade
|1=''[[Modestobacter multiseptatus|M. multiseptatus]]''
|2={{clade
|1=''[[Modestobacter versicolor|M. versicolor]]''
|2={{clade
|1=''[[Modestobacter marinus|M. marinus]]''
⚫
|2=''[[Modestobacter roseus|M. roseus]]''
}}
}}
⚫
}}
⚫
}}
⚫
|label3=''[[Geodermatophilus]]''
⚫
|3={{clade
|1=''[[Geodermatophilus ruber|G. ruber]]''
⚫
|2={{clade
|1=''[[Geodermatophilus siccatus|G. siccatus]]''
|2={{clade
|1={{clade
|1=''[[Geodermatophilus africanus|G. africanus]]''
|2=''[[Geodermatophilus obscurus|G. obscurus]]''
}}
|2={{clade
|1={{clade
|1=''[[Geodermatophilus arenarius|G. arenarius]]''
|2=''[[Geodermatophilus nigrescens|G. nigrescens]]''
}}
|2={{clade
|1=''[[Geodermatophilus amargosae|G. amargosae]]''
|2={{clade
|1={{clade
|1=''[[Geodermatophilus normandii|G. normandii]]''
|2=''[[Geodermatophilus saharensis|G. saharensis]]''
}}
|2={{clade
|1=''[[Geodermatophilus telluris|G. telluris]]''
|2=''[[Geodermatophilus tzadiensis|G. tzadiensis]]''
}}
}}
}}
}}
}}
⚫
}}
}}
}}
}}
}}
}}
}}
}}
}}
|}

==See also==
* [[List of bacterial orders]]
* [[List of bacteria genera]]


==References==
==References==
{{Reflist|30em}}
{{Reflist|30em}}


⚫
{{Bacteria classification}}
{{Portal bar|Biology}}
{{Portal bar|Biology}}
⚫
{{Bacteria classification}}
{{Taxonbar|from=Q5533978}}
{{Taxonbar|from=Q5533978}}

[[Category:Actinomycetia]]
[[Category:Actinomycetia]]
[[Category:Bacteria families]]
[[Category:Bacteria families]]


{{actinobacteria-stub}}
{{actinobacteria-stub}}

Revision as of 14:21, 1 January 2024

Geodermatophilaceae
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Actinomycetota
Class: Actinomycetia
Order: Geodermatophilales
Family: Geodermatophilaceae
Normand 2006[1]
Type genus
Geodermatophilus
Luedemann 1968
Genera[2]

The Geodermatophilaceae are an actinomycete family of bacteria.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI)[4]

16S rRNA based LTP_08_2023[5][6][7] 120 marker proteins based GTDB 08-RS214[8][9][10]

Goekera Montero-Calasanz et al. 2023

Klenkia Montero-Calasanz et al. 2018

Modestobacter Mevs et al. 2000

Petropleomorpha Li 2023

Blastococcus Ahrens & Moll 1970

Geodermatophilus Luedemann 1968

See also

References

  1. ^ Normand P. (2006). "Geodermatophilaceae fam. nov., a formal description". Int J Syst Evol Microbiol. 56 (10): 2277–2278. doi:10.1099/ijs.0.64298-0. PMID 17012547.
  2. ^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomic Abstract for the genera". The NamesforLife Abstracts. doi:10.1601/tx.30543.
  3. ^ A.C. Parte; et al. "Geodermatophilaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
  4. ^ Sayers; et al. "Geodermatophilaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
  5. ^ "The LTP". Retrieved 20 November 2023.
  6. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  7. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  8. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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