RAPH1: Difference between revisions

RAPH1
Available structures
PDB	Human UniProt search: PDBe RCSB
List of PDB id codes
	4GMV, 4GN1
Identifiers
Aliases	RAPH1, ALS2CR18, ALS2CR9, LPD, PREL-2, PREL2, RMO1, RalGDS/AF-6, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
External IDs	OMIM: 609035; MGI: 1924550; HomoloGene: 71030; GeneCards: RAPH1; OMA:RAPH1 - orthologs
Gene location (Human)
Chr.	Chromosome 2 (human)
End	203,535,335 bp
Gene location (Mouse)
Chr.	Chromosome 1 (mouse)
End	60,606,263 bp
RNA expression pattern
	Top expressed in
	pancreatic epithelial cell; ; tibia; ; pancreatic ductal cell; ; endothelial cell; ; synovial joint; ; synovial membrane; ; visceral pleura; ; skin of arm; ; cartilage tissue; ; pars reticulata;
	Top expressed in
	otolith organ; ; utricle; ; body of femur; ; Rostral migratory stream; ; myocardium of ventricle; ; adrenal gland; ; superior cervical ganglion; ; substantia nigra; ; soleus muscle; ; left lung lobe;
	More reference expression data
	n/a
Gene ontology
Molecular function	protein binding;
Cellular component	cytoplasm; filopodium; cell projection; cytoskeleton; cell leading edge; membrane; lamellipodium; cytosol; plasma membrane; nuclear body;
Biological process	signal transduction; axon extension;
	Sources:Amigo / QuickGO
Orthologs
	65059
	77300
	ENSG00000173166
	ENSMUSG00000026014
	Q70E73
	n/a
	NM_025252; NM_203365; NM_213589; NM_001329728
	NM_001045513
	NP_001316657; NP_976241; NP_998754
	n/a
	Wikidata
View/Edit Human	View/Edit Mouse

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Latest revision as of 11:15, 18 August 2023

Ras-associated and pleckstrin homology domains-containing protein 1 is a protein that in humans is encoded by the RAPH1 gene.^[5]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000173166 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000026014 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Entrez Gene: RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1".

Nagase T, Kikuno R, Hattori A, et al. (2001). "Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (6): 347–55. doi:10.1093/dnares/7.6.347. PMID 11214970.
Hadano S, Hand CK, Osuga H, et al. (2001). "A gene encoding a putative GTPase regulator is mutated in familial amyotrophic lateral sclerosis 2". Nat. Genet. 29 (2): 166–73. doi:10.1038/ng1001-166. PMID 11586298. S2CID 52828189.
Salazar MA, Kwiatkowski AV, Pellegrini L, et al. (2004). "Tuba, a novel protein containing bin/amphiphysin/Rvs and Dbl homology domains, links dynamin to regulation of the actin cytoskeleton". J. Biol. Chem. 278 (49): 49031–43. doi:10.1074/jbc.M308104200. PMID 14506234.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
Krause M, Leslie JD, Stewart M, et al. (2004). "Lamellipodin, an Ena/VASP ligand, is implicated in the regulation of lamellipodial dynamics". Dev. Cell. 7 (4): 571–83. doi:10.1016/j.devcel.2004.07.024. PMID 15469845.
Dahl E, Sadr-Nabavi A, Klopocki E, et al. (2005). "Systematic identification and molecular characterization of genes differentially expressed in breast and ovarian cancer". J. Pathol. 205 (1): 21–8. doi:10.1002/path.1687. PMID 15586368. S2CID 8336323.
Eppert K, Wunder JS, Aneliunas V, et al. (2005). "Altered expression and deletion of RMO1 in osteosarcoma". Int. J. Cancer. 114 (5): 738–46. doi:10.1002/ijc.20786. PMID 15609301. S2CID 23990601.
Jenzora A, Behrendt B, Small JV, et al. (2005). "PREL1 provides a link from Ras signalling to the actin cytoskeleton via Ena/VASP proteins". FEBS Lett. 579 (2): 455–63. doi:10.1016/j.febslet.2004.10.110. PMID 15642358. S2CID 25677449.
Hillier LW, Graves TA, Fulton RS, et al. (2005). "Generation and annotation of the DNA sequences of human chromosomes 2 and 4". Nature. 434 (7034): 724–31. Bibcode:2005Natur.434..724H. doi:10.1038/nature03466. PMID 15815621.

This article on a gene on human chromosome 2 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000173166 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000026014 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1".

[1]

[2]

[3]

[4]

[5]

@@ Line 1: / Line 1: @@
+{{Short description|Protein-coding gene in the species Homo sapiens}}
 {{Infobox_gene}}
 '''Ras-associated and pleckstrin homology domains-containing protein 1''' is a [[protein]] that in [[Human|humans]] is encoded by the ''RAPH1'' [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=65059| accessdate = }}</ref>
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 ==References==
@@ Line 12: / Line 9: @@
 ==Further reading==
 {{refbegin | 2}}
+*{{cite journal   |vauthors=Nagase T, Kikuno R, Hattori A, etal |title=Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. |journal=DNA Res. |volume=7 |issue= 6 |pages= 347–55 |year= 2001 |pmid= 11214970 |doi=10.1093/dnares/7.6.347  |doi-access=free }}
-{{PBB_Further_reading
+*{{cite journal   |vauthors=Hadano S, Hand CK, Osuga H, etal |title=A gene encoding a putative GTPase regulator is mutated in familial amyotrophic lateral sclerosis 2. |journal=Nat. Genet. |volume=29 |issue= 2 |pages= 166–73 |year= 2001 |pmid= 11586298 |doi= 10.1038/ng1001-166 |s2cid=52828189 }}
-| citations =
-*{{cite journal   |vauthors=Nagase T, Kikuno R, Hattori A, etal |title=Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. |journal=DNA Res. |volume=7 |issue= 6 |pages= 347–55 |year= 2001 |pmid= 11214970 |doi=10.1093/dnares/7.6.347  }}
+*{{cite journal   |vauthors=Salazar MA, Kwiatkowski AV, Pellegrini L, etal |title=Tuba, a novel protein containing bin/amphiphysin/Rvs and Dbl homology domains, links dynamin to regulation of the actin cytoskeleton. |journal=J. Biol. Chem. |volume=278 |issue= 49 |pages= 49031–43 |year= 2004 |pmid= 14506234 |doi= 10.1074/jbc.M308104200 |doi-access= free }}
-*{{cite journal   |vauthors=Hadano S, Hand CK, Osuga H, etal |title=A gene encoding a putative GTPase regulator is mutated in familial amyotrophic lateral sclerosis 2. |journal=Nat. Genet. |volume=29 |issue= 2 |pages= 166–73 |year= 2001 |pmid= 11586298 |doi= 10.1038/ng1001-166 }}
+*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 |doi-access= free }}
-*{{cite journal   |vauthors=Salazar MA, Kwiatkowski AV, Pellegrini L, etal |title=Tuba, a novel protein containing bin/amphiphysin/Rvs and Dbl homology domains, links dynamin to regulation of the actin cytoskeleton. |journal=J. Biol. Chem. |volume=278 |issue= 49 |pages= 49031–43 |year= 2004 |pmid= 14506234 |doi= 10.1074/jbc.M308104200 }}
+*{{cite journal   |vauthors=Beausoleil SA, Jedrychowski M, Schwartz D, etal |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130–5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101  | pmc=514446 |bibcode=2004PNAS..10112130B |doi-access=free }}
-*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
+*{{cite journal   |vauthors=Krause M, Leslie JD, Stewart M, etal |title=Lamellipodin, an Ena/VASP ligand, is implicated in the regulation of lamellipodial dynamics. |journal=Dev. Cell |volume=7 |issue= 4 |pages= 571–83 |year= 2004 |pmid= 15469845 |doi= 10.1016/j.devcel.2004.07.024 |doi-access= free }}
-*{{cite journal   |vauthors=Beausoleil SA, Jedrychowski M, Schwartz D, etal |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130–5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101  | pmc=514446 }}
+*{{cite journal   |vauthors=Dahl E, Sadr-Nabavi A, Klopocki E, etal |title=Systematic identification and molecular characterization of genes differentially expressed in breast and ovarian cancer. |journal=J. Pathol. |volume=205 |issue= 1 |pages= 21–8 |year= 2005 |pmid= 15586368 |doi= 10.1002/path.1687 |s2cid=8336323 }}
-*{{cite journal   |vauthors=Krause M, Leslie JD, Stewart M, etal |title=Lamellipodin, an Ena/VASP ligand, is implicated in the regulation of lamellipodial dynamics. |journal=Dev. Cell |volume=7 |issue= 4 |pages= 571–83 |year= 2004 |pmid= 15469845 |doi= 10.1016/j.devcel.2004.07.024 }}
+*{{cite journal   |vauthors=Eppert K, Wunder JS, Aneliunas V, etal |title=Altered expression and deletion of RMO1 in osteosarcoma. |journal=Int. J. Cancer |volume=114 |issue= 5 |pages= 738–46 |year= 2005 |pmid= 15609301 |doi= 10.1002/ijc.20786 |s2cid=23990601 }}
-*{{cite journal   |vauthors=Dahl E, Sadr-Nabavi A, Klopocki E, etal |title=Systematic identification and molecular characterization of genes differentially expressed in breast and ovarian cancer. |journal=J. Pathol. |volume=205 |issue= 1 |pages= 21–8 |year= 2005 |pmid= 15586368 |doi= 10.1002/path.1687 }}
+*{{cite journal   |vauthors=Jenzora A, Behrendt B, Small JV, etal |title=PREL1 provides a link from Ras signalling to the actin cytoskeleton via Ena/VASP proteins. |journal=FEBS Lett. |volume=579 |issue= 2 |pages= 455–63 |year= 2005 |pmid= 15642358 |doi= 10.1016/j.febslet.2004.10.110 |s2cid=25677449 |doi-access= }}
-*{{cite journal   |vauthors=Eppert K, Wunder JS, Aneliunas V, etal |title=Altered expression and deletion of RMO1 in osteosarcoma. |journal=Int. J. Cancer |volume=114 |issue= 5 |pages= 738–46 |year= 2005 |pmid= 15609301 |doi= 10.1002/ijc.20786 }}
+*{{cite journal   |vauthors=Hillier LW, Graves TA, Fulton RS, etal |title=Generation and annotation of the DNA sequences of human chromosomes 2 and 4. |journal=Nature |volume=434 |issue= 7034 |pages= 724–31 |year= 2005 |pmid= 15815621 |doi= 10.1038/nature03466 |bibcode=2005Natur.434..724H |doi-access= free }}
-*{{cite journal   |vauthors=Jenzora A, Behrendt B, Small JV, etal |title=PREL1 provides a link from Ras signalling to the actin cytoskeleton via Ena/VASP proteins. |journal=FEBS Lett. |volume=579 |issue= 2 |pages= 455–63 |year= 2005 |pmid= 15642358 |doi= 10.1016/j.febslet.2004.10.110 }}
-*{{cite journal   |vauthors=Hillier LW, Graves TA, Fulton RS, etal |title=Generation and annotation of the DNA sequences of human chromosomes 2 and 4. |journal=Nature |volume=434 |issue= 7034 |pages= 724–31 |year= 2005 |pmid= 15815621 |doi= 10.1038/nature03466 }}
-}}
 {{refend}}
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