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- research-articleJanuary 2024
The deep learning applications in IoT-based bio- and medical informatics: a systematic literature review
Neural Computing and Applications (NCAA), Volume 36, Issue 11Pages 5757–5797https://doi.org/10.1007/s00521-023-09366-3AbstractNowadays, machine learning (ML) has attained a high level of achievement in many contexts. Considering the significance of ML in medical and bioinformatics owing to its accuracy, many investigators discussed multiple solutions for developing the ...
- review-articleFebruary 2024
Medical informed machine learning: A scoping review and future research directions
Artificial Intelligence in Medicine (AIIM), Volume 145, Issue Chttps://doi.org/10.1016/j.artmed.2023.102676AbstractCombining domain knowledge (DK) and machine learning is a recent research stream to overcome multiple issues like limited explainability, lack of data, and insufficient robustness. Most approaches applying informed machine learning (IML), however,...
Highlights- In recent years, ML models are frequently combined with domain knowledge.
- Medical DK is provided by experts, so research should investigate their decisions.
- The motives for MedIML are manifold and guidelines on including DK are ...
- research-articleJune 2023
AIMDP: An Artificial Intelligence Modern Data Platform. Use case for Spanish national health service data silo
- Alberto S. Ortega-Calvo,
- Roberto Morcillo-Jimenez,
- Carlos Fernandez-Basso,
- Karel Gutiérrez-Batista,
- Maria-Amparo Vila,
- Maria J. Martin-Bautista
Future Generation Computer Systems (FGCS), Volume 143, Issue CPages 248–264https://doi.org/10.1016/j.future.2023.02.002AbstractThe huge amount of data being handled today in any environment, such as energy, economics or healthcare, makes data management systems key to extracting information, analysing and creating more efficient daily processes in these ...
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Highlights- We propose a new platform that uses Big Data technologies to manage and apply AI.
- research-articleJune 2023
Deep learning to refine the identification of high-quality clinical research articles from the biomedical literature: Performance evaluation
- Cynthia Lokker,
- Elham Bagheri,
- Wael Abdelkader,
- Rick Parrish,
- Muhammad Afzal,
- Tamara Navarro,
- Chris Cotoi,
- Federico Germini,
- Lori Linkins,
- R. Brian Haynes,
- Lingyang Chu,
- Alfonso Iorio
Journal of Biomedical Informatics (JOBI), Volume 142, Issue Chttps://doi.org/10.1016/j.jbi.2023.104384Graphical abstractDisplay Omitted
Abstract BackgroundIdentifying practice-ready evidence-based journal articles in medicine is a challenge due to the sheer volume of biomedical research publications. Newer approaches to support evidence discovery apply deep learning techniques to improve ...
- research-articleMay 2023
Explainable discovery of disease biomarkers: The case of ovarian cancer to illustrate the best practice in machine learning and Shapley analysis
Journal of Biomedical Informatics (JOBI), Volume 141, Issue Chttps://doi.org/10.1016/j.jbi.2023.104365Abstract Objective:Ovarian cancer is a significant health issue with lasting impacts on the community. Despite recent advances in surgical, chemotherapeutic and radiotherapeutic interventions, they have had only marginal impacts due to an inability to ...
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Highlights- Machine learning and Shapley analysis are suitable for biomarker discovery tasks.
- Pipeline achieves consistent result with statistical analysis on feature contribution.
- Shapley analysis provides opportunities for accountability via ...
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- review-articleMay 2023
Synthetic data generation: State of the art in health care domain
Computer Science Review (COMPSR), Volume 48, Issue Chttps://doi.org/10.1016/j.cosrev.2023.100546AbstractRecent progress in artificial intelligence and machine learning has led to the growth of research in every aspect of life including the health care domain. However, privacy risks and legislations hinder the availability of patient data to ...
Highlights- A narrative review of the state of the art in synthetic data generation in healthcare.
- We investigate the strengths and weaknesses of existing approaches for synthetic medical data generation.
- We provide consolidation and ...
- research-articleApril 2023
BiLSTM deep neural network model for imbalanced medical data of IoT systems
Future Generation Computer Systems (FGCS), Volume 141, Issue CPages 489–499https://doi.org/10.1016/j.future.2022.12.004AbstractHealth informatics is one of the most developed field in recent time. Computational Intelligence is among the most influential factors that may help to improve patient oriented and secure decision support model. In this article we ...
Highlights- Improved data imbalancing model for deep neural networks.
- BiLSTM neural network ...
- research-articleNovember 2022
Wikipedia searches and the epidemiology of infectious diseases: A systematic review
Data & Knowledge Engineering (DAKE), Volume 142, Issue Chttps://doi.org/10.1016/j.datak.2022.102093AbstractThis review aims to collect, analyse and synthesize the available evidence that can be provided by Wikipedia for epidemiologic surveillance purposes. PRISMA guidelines were followed. PubMed/Medline and Scopus were consulted. Out of 238 ...
Highlights- This review shows an increased academic interest in Wikipedia searches and the epidemiology of infectious diseases.
- research-articleOctober 2022
Mapping layperson medical terminology into the Human Phenotype Ontology using neural machine translation models
Expert Systems with Applications: An International Journal (EXWA), Volume 204, Issue Chttps://doi.org/10.1016/j.eswa.2022.117446AbstractIn the medical domain there exists a terminological gap between patients and caregivers and the healthcare professionals. This gap may hinder the success of the communication between healthcare consumers and professionals in the field, with ...
Highlights- We propose a method to map lay expressions into the Human Phenotype Ontology.
- Inspired in machine translation we design different deep learning architectures.
- We explore strategies to encode the semantic space of the terms in the ...
- review-articleMarch 2022
Real-time data analysis in health monitoring systems: A comprehensive systematic literature review
- Antonio Iyda Paganelli,
- Abel González Mondéjar,
- Abner Cardoso da Silva,
- Greis Silva-Calpa,
- Mateus F. Teixeira,
- Felipe Carvalho,
- Alberto Raposo,
- Markus Endler
Journal of Biomedical Informatics (JOBI), Volume 127, Issue Chttps://doi.org/10.1016/j.jbi.2022.104009Graphical abstractDisplay Omitted
Highlights- A comprehensive and in-deep review of studies on health monitoring systems that performed data mining tasks in real-time.
Health monitoring systems (HMSs) capture physiological measurements through biosensors (sensing), obtain significant properties and measures from the output signal (perceiving), use algorithms for data analysis (reasoning), and trigger ...
- research-articleFebruary 2022
Impact of Provider Prior Use of HIE on System Complexity, Performance, Patient Care, Quality and System Concerns
Information Systems Frontiers (KLU-ISFI), Volume 24, Issue 1Pages 121–131https://doi.org/10.1007/s10796-020-10064-xAbstractTo date, most HIE studies have investigated user perceptions of value prior to use. Few studies have assessed factors associated with the value of HIE through its actual use. This study investigates provider perceptions on HIE comparing those who ...
- research-articleNovember 2021
Kidney Age Index (KAI): A novel age-related biomarker to estimate kidney function in patients with diabetic kidney disease using machine learning
Computer Methods and Programs in Biomedicine (CBIO), Volume 211, Issue Chttps://doi.org/10.1016/j.cmpb.2021.106434Highlights- Several methods have been developed to estimate renal risk, however with a high margin of error and difficult to interpret.
With aging, patients with diabetic kidney disease (DKD) show progressive decrease in kidney function. We investigated whether the deviation of biological age (BA) from the chronological age (CA) due ...
- ArticleSeptember 2021
Overview of the CLEF eHealth Evaluation Lab 2021
- Hanna Suominen,
- Lorraine Goeuriot,
- Liadh Kelly,
- Laura Alonso Alemany,
- Elias Bassani,
- Nicola Brew-Sam,
- Viviana Cotik,
- Darío Filippo,
- Gabriela González-Sáez,
- Franco Luque,
- Philippe Mulhem,
- Gabriella Pasi,
- Roland Roller,
- Sandaru Seneviratne,
- Rishabh Upadhyay,
- Jorge Vivaldi,
- Marco Viviani,
- Chenchen Xu
Experimental IR Meets Multilinguality, Multimodality, and InteractionPages 308–323https://doi.org/10.1007/978-3-030-85251-1_21AbstractIn this paper, we provide an overview of the ninth annual edition of the CLEF eHealth evaluation lab. CLEF eHealth 2021 continues our evaluation resource building efforts around the easing and support of patients, their next-of-kins, health care ...
- ArticleSeptember 2021
Multi-features-Based Automatic Clinical Coding for Chinese ICD-9-CM-3
Artificial Neural Networks and Machine Learning – ICANN 2021Pages 473–486https://doi.org/10.1007/978-3-030-86383-8_38AbstractICD-9-CM Volume 3 (ICD-9-CM-3), as a subset of the ICD-9-CM, is a standard system used to classify operations and medical procedures for billing purposes. With the gradual maturity of the DRG system, the precise coding of ICD-9-CM-3 is ...
- ArticleSeptember 2021
Yeasts Automated Classification with Extremely Randomized Forests
Computational Science and Its Applications – ICCSA 2021Pages 436–447https://doi.org/10.1007/978-3-030-87007-2_31AbstractSeveral pathogenic yeast species are resistant to pharmaceutical agents and have evolved so quickly over time that often they cannot be stopped with antifungal treatments. In particular, Candida species can cause yeast infections in patients’ ...
- ArticleSeptember 2021
The Evolution of Artificial Intelligence in Medical Informatics: A Bibliometric Analysis
Progress in Artificial IntelligencePages 121–133https://doi.org/10.1007/978-3-030-86230-5_10AbstractArtificial intelligence (AI) and medical informatics research fields have considerable overlap, with technologies supporting different health issues in different contexts. In this work, we aimed to map out and understand the contributions of AI in ...
- research-articleJuly 2021
Tensor learning of pointwise mutual information from EHR data for early prediction of sepsis
Computers in Biology and Medicine (CBIM), Volume 134, Issue Chttps://doi.org/10.1016/j.compbiomed.2021.104430AbstractEarly detection of sepsis can facilitate early clinical intervention with effective treatment and may reduce sepsis mortality rates. In view of this, machine learning-based automated diagnosis of sepsis using easily recordable ...
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Highlights- This work applies mutual information tensor analysis on EHR data for sepsis detection.
- review-articleJune 2021
Internet of Things in active cancer Treatment: A systematic review
- Diogo Albino de Queiroz,
- Cristiano André da Costa,
- Eveline Aparecida Isquierdo Fonseca de Queiroz,
- Erico Folchini da Silveira,
- Rodrigo da Rosa Righi
Journal of Biomedical Informatics (JOBI), Volume 118, Issue Chttps://doi.org/10.1016/j.jbi.2021.103814Graphical abstractDisplay Omitted
Highlights- Addresses the use of IoT devices in cancer patients undergoing treatment.
- ...
The Internet of Things (IoT) applied to the treatment of cancer patients has been explored and the results are promising. This review aims to identify the applications and benefits of using IoT techniques, especially wearable devices, ...
- research-articleMay 2021
Using information theory to optimize a diagnostic threshold to match physician-ordering practice
Journal of Biomedical Informatics (JOBI), Volume 117, Issue Chttps://doi.org/10.1016/j.jbi.2021.103756Graphical abstractDisplay Omitted
Highlights- Information theory directly measures test value as reduction in uncertainty.
- ...
Clinicians order laboratory tests in an effort to reduce diagnostic or therapeutic uncertainty. Information theory provides the opportunity to quantify the degree to which a test result is expected to reduce ...
- research-articleMay 2021
Design of a pendulum-type crutch-walk training device for presenting sensation to be falling
Artificial Life and Robotics (SPALR), Volume 26, Issue 2Pages 195–201https://doi.org/10.1007/s10015-020-00667-7AbstractWe may be suddenly forced to use crutches when having injuries to our legs, and, at that time, are often unfamiliar with the use of the crutches. To prevent secondary accidents that are caused by the lack of the patient’s knowledge of using ...